An improved probability mapping approach to assess genome mosaicism (Q24805107)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12974984%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

title

An improved probability mapping approach to assess genome mosaicism (English)

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8 November 2019

1

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8 November 2019

Johann Peter Gogarten

series ordinal

2

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8 November 2019

author name string

Olga Zhaxybayeva

series ordinal

1

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language of work or name

English

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publication date

15 September 2003

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8 November 2019

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8 November 2019

volume

4

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8 November 2019

issue

1

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8 November 2019

page(s)

37

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https://scigraph.springernature.com/pub.10.1186/1471-2164-4-37

8 November 2019

exact match

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cites work

Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses

1 reference

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Genome sequence of Halobacterium species NRC-1

7 April 2017

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

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Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

7 April 2017

1 reference

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MRBAYES: Bayesian inference of phylogenetic trees

7 April 2017

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Phylogenies from molecular sequences: inference and reliability

7 April 2017

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Horizontal gene transfer in prokaryotes: quantification and classification

7 April 2017

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Homology a personal view on some of the problems

7 April 2017

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Evolution of photosynthetic prokaryotes: a maximum-likelihood mapping approach

9 May 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Taxon sampling, bioinformatics, and phylogenomics

28 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Ancient phylogenetic relationships

28 September 2017

1 reference

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SEALS: a system for easy analysis of lots of sequences.

28 September 2017

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Instability of quartet analyses of molecular sequence data by the maximum likelihood method: the Cetacea/Artiodactyla relationships

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Monophyletic origins of the metazoa: an evolutionary link with fungi

28 September 2017

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The robustness of two phylogenetic methods: four-taxon simulations reveal a slight superiority of maximum likelihood over neighbor joining

28 September 2017

1 reference

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Is sparse taxon sampling a problem for phylogenetic inference?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Defining the core of nontransferable prokaryotic genes: the euryarchaeal core

30 May 2018

1 reference

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The mosaic nature of the eukaryotic nucleus.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Horizontal gene transfer accelerates genome innovation and evolution.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Whole-Genome Analysis of Photosynthetic Prokaryotes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

Is it better to add taxa or characters to a difficult phylogenetic problem?

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

PAL: an object-oriented programming library for molecular evolution and phylogenetics.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=222983

28 November 2018

Identifiers

DOI

10.1186/1471-2164-4-37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12974984%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

8 November 2019

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-4-37

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12974984%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

1 reference