Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly (Q24810392)

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English	Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly	scientific article

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scholarly article

1 reference

Europe PubMed Central

3 July 2017

Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly (English)

1 reference

Europe PubMed Central

3 July 2017

Masaaki Morikawa

object named as

Masaaki Morikawa

4

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object named as

Noriyuki Ishii

2

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author name string

Toshihiko Akiba

1

1 reference

Europe PubMed Central

3 July 2017

Naeem Rashid

3

1 reference

Europe PubMed Central

3 July 2017

Tadayuki Imanaka

5

1 reference

Europe PubMed Central

3 July 2017

Kazuaki Harata

6

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Europe PubMed Central

3 July 2017

language of work or name

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publication date

13 June 2005

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Europe PubMed Central

3 July 2017

Nucleic Acids Research

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Europe PubMed Central

3 July 2017

33

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Europe PubMed Central

3 July 2017

10

1 reference

Europe PubMed Central

3 July 2017

3412-3423

1 reference

Europe PubMed Central

3 July 2017

Insights into DNA recombination from the structure of a RAD51-BRCA2 complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

7 April 2017

Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation

1 reference

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7 April 2017

Conserved domains in DNA repair proteins and evolution of repair systems

1 reference

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7 April 2017

DNA stability at temperatures typical for hyperthermophiles

1 reference

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7 April 2017

Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold

1 reference

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7 April 2017

Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2

1 reference

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7 April 2017

Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes

1 reference

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7 April 2017

Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition

1 reference

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7 April 2017

The structure of the E. coli recA protein monomer and polymer

1 reference

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7 April 2017

The CCP4 suite: programs for protein crystallography

1 reference

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7 April 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

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7 April 2017

Crystal structure of a Rad51 filament

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Structural basis for octameric ring formation and DNA interaction of the human homologous-pairing protein Dmc1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Archaeal RadA protein binds DNA as both helical filaments and octameric rings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Comparison of bacteriophage T4 UvsX and human Rad51 filaments suggests that RecA-like polymers may have evolved independently.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

The question of DNA repair in hyperthermophilic archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

A phylogenomic study of DNA repair genes, proteins, and processes

1 reference

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28 September 2017

Specific interaction between DNA polymerase II (PolD) and RadB, a Rad51/Dmc1 homolog, in Pyrococcus furiosus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Repair of extensive ionizing-radiation DNA damage at 95 degrees C in the hyperthermophilic archaeon Pyrococcus furiosus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Characterization of a RecA/RAD51 homologue from the hyperthermophilic archaeon Pyrococcus sp. KOD1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Extreme resistance to thermally induced DNA backbone breaks in the hyperthermophilic archaeon Pyrococcus furiosus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Structure of helical RecA-DNA complexes. Complexes formed in the presence of ATP-gamma-S or ATP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

Nucleotide sequence and transcriptional regulation of the yeast recombinational repair gene RAD51

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 September 2017

The RadB protein from Pyrococcus does not complement E. coli recA mutations in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

30 May 2018

DNA repair systems in archaea: mementos from the last universal common ancestor?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

30 May 2018

A unique DNase activity shares the active site with ATPase activity of the RecA/Rad51 homologue (Pk-REC) from a hyperthermophilic archaeon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

30 May 2018

Expression of the recA gene of Escherichia coli in several species of gram-negative bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

30 May 2018

Crystal structure of RecA from Deinococcus radiodurans: insights into the structural basis of extreme radioresistance

1 reference

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Crystal structures of Escherichia coli RecA in a compressed helical filament.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 November 2018

Crystal structure of archaeal recombinase RADA: a snapshot of its extended conformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 November 2018

Archaeal RecA homologues: different response to DNA-damaging agents in mesophilic and thermophilic Archaea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 November 2018

A RecA/RAD51 homologue from a hyperthermophilic archaeon retains the major RecA domain only.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1150280

28 November 2018

Crystallization and preliminary X-ray study of Pk--REC from a hyperthermophilic archaeon, Pyrococcus kodakaraensis KOD1

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Domain analysis of an archaeal RadA protein for the strand exchange activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Asymmetry in the recA protein-DNA filament

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

N-terminal 33 amino acid residues of Escherichia coli RecA protein contribute to its self-assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/15956102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKI662

1 reference

Europe PubMed Central

3 July 2017

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1 reference

Europe PubMed Central

3 July 2017

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