Triplex-induced recombination and repair in the pyrimidine motif (Q24810418)

3 July 2017

title

Triplex-induced recombination and repair in the pyrimidine motif (English)

1 reference

3 July 2017

Daniel L Weeks

3

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author name string

Jennifer M Kalish

series ordinal

1

1 reference

3 July 2017

Michael M Seidman

series ordinal

2

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3 July 2017

Peter M Glazer

series ordinal

4

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3 July 2017

language of work or name

English

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publication date

16 June 2005

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3 July 2017

published in

Nucleic Acids Research

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3 July 2017

volume

33

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3 July 2017

issue

11

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3 July 2017

page(s)

3492-3502

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A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

3 July 2017

cites work

1 reference

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Distance and affinity dependence of triplex-induced recombination.

7 April 2017

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A potent and specific morpholino antisense inhibitor of hepatitis C translation in mice

28 September 2017

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Site-directed recombination via bifunctional PNA-DNA conjugates

28 September 2017

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Human XPA and RPA DNA repair proteins participate in specific recognition of triplex-induced helical distortions

28 September 2017

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Inhibition of HIV-1 Tat-dependent trans activation by steric block chimeric 2'-O-methyl/LNA oligoribonucleotides.

28 September 2017

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Triplex forming oligonucleotides: sequence-specific tools for gene targeting

28 September 2017

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Chromosome targeting at short polypurine sites by cationic triplex-forming oligonucleotides.

28 September 2017

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Triplex-induced recombination in human cell-free extracts. Dependence on XPA and HsRad51.

28 September 2017

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2'-O,4'-C-methylene bridged nucleic acid modification promotes pyrimidine motif triplex DNA formation at physiological pH: thermodynamic and kinetic studies.

28 September 2017

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High-frequency intrachromosomal gene conversion induced by triplex-forming oligonucleotides microinjected into mouse cells

28 September 2017

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Potent and nontoxic antisense oligonucleotides containing locked nucleic acids

28 September 2017

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Pyrimidine morpholino oligonucleotides form a stable triple helix in the absence of magnesium ions

28 September 2017

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Triple-helix formation induces recombination in mammalian cells via a nucleotide excision repair-dependent pathway

28 September 2017

1 reference

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Triplex formation by oligonucleotides containing 5-(1-propynyl)-2'-deoxyuridine: decreased magnesium dependence and improved intracellular gene targeting

28 September 2017

1 reference

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Chromosomal mutations induced by triplex-forming oligonucleotides in mammalian cells

28 September 2017

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Covalent crosslinks introduced via a triple helix-forming oligonucleotide coupled to psoralen are inefficiently repaired

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Antisense binding enhanced by tertiary interactions: binding of phosphorothioate and N3'-->P5' phosphoramidate hexanucleotides to the catalytic core of a group I ribozyme from the mammalian pathogen Pneumocystis carinii

28 September 2017

1 reference

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Peptide nucleic acid-targeted mutagenesis of a chromosomal gene in mouse cells

28 September 2017

1 reference

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Triplex DNA: fundamentals, advances, and potential applications for gene therapy

28 September 2017

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Antileukemia effect of c-myc N3'-->P5' phosphoramidate antisense oligonucleotides in vivo

28 September 2017

1 reference

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Accessibility of nuclear DNA to triplex-forming oligonucleotides: the integrated HIV-1 provirus as a target

28 September 2017

1 reference

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Recombination induced by triple-helix-targeted DNA damage in mammalian cells

28 September 2017

1 reference

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Structural features and stability of an RNA triple helix in solution

28 September 2017

1 reference

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Mutagenesis in mammalian cells induced by triple helix formation and transcription-coupled repair

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Oligonucleotide N3'-->P5' phosphoramidates as antisense agents

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Monovalent cation effects on intermolecular purine-purine-pyrimidine triple-helix formation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Inhibition of human immunodeficiency virus type-1 env expression by C-5 propyne oligonucleotides specific for Rev-response element stem-loop V.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Targeted mutagenesis in mammalian cells mediated by intracellular triple helix formation

28 September 2017

1 reference

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High-affinity triple helix formation by synthetic oligonucleotides at a site within a selectable mammalian gene.

28 September 2017

1 reference

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Altered Repair of Targeted Psoralen Photoadducts in the Context of an Oligonucleotide-mediated Triple Helix

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Oligonucleotide N3'-->P5' phosphoramidates

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Poly(pyrimidine) . poly(purine) synthetic DNAs containing 5-methylcytosine form stable triplexes at neutral pH

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Site-specific oligonucleotide binding represses transcription of the human c-myc gene in vitro

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Sequence-specific recognition of the major groove of DNA by oligodeoxynucleotides via triple helix formation. Footprinting studies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Human nucleotide excision repair in vitro: repair of pyrimidine dimers, psoralen and cisplatin adducts by HeLa cell-free extract.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Inhibition of simian virus 40 DNA replication in CV-1 cells by an oligodeoxynucleotide covalently linked to an intercalating agent

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Second structural motif for recognition of DNA by oligonucleotide-directed triple-helix formation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Effect of 5-methylcytosine on the stability of triple-stranded DNA--a thermodynamic study

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Assembly of transfected DNA into chromatin: structural changes in the origin-promoter-enhancer region upon replication

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Sequence-specific cleavage of double helical DNA by triple helix formation.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Use of supF, an Escherichia coli tyrosine suppressor tRNA gene, as a mutagenic target in shuttle-vector plasmids.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

A signature element distinguishes sibling and independent mutations in a shuttle vector plasmid

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Complementation of the xeroderma pigmentosum DNA repair defect in cell-free extracts.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Sequence and pH effects of LNA-containing triple helix-forming oligonucleotides: physical chemistry, biochemistry, and modeling studies

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Minimum number of 2'-O-(2-aminoethyl) residues required for gene knockout activity by triple helix forming oligonucleotides

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151591

Specific mutations induced by triplex-forming oligonucleotides in mice

28 November 2018

1 reference

12 December 2020

Specificity in formation of triple-stranded nucleic acid helical complexes: studies with agarose-linked polyribonucleotide affinity columns

1 reference

12 December 2020

Involvement of growth factor receptors in the mammalian UVC response

1 reference

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Targeted gene knockout mediated by triple helix forming oligonucleotides

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKI659

1 reference

release_7g4xpiluznbodhhqbootr3lwxm

3 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/7g4xpiluznbodhhqbootr3lwxm

24 November 2022

mapped directly with Wikidata item

PMC publication ID

1151591

0 references

1 reference