GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data (Q24813561)

3 July 2017

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data (English)

1 reference

3 July 2017

1 reference

8

1 reference

3 July 2017

9

1 reference

3 July 2017

Patricio Yankilevich

3

0 references

Pablo Minguez

Pablo Minguez

5

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Juan M. Vaquerizas

Juan M Vaquerizas

1

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Ramón Díaz-Uriarte

Ramón Díaz-Uriarte

6

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Fátima Al-Shahrour

7

Fátima Al-Shahrour

1 reference

3 July 2017

Lucía Conde

2

1 reference

PubMed ID

15980548

3 July 2017

Amaya Cabezón

4

1 reference

PubMed ID

15980548

3 July 2017

language of work or name

English

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publication date

1 July 2005

1 reference

3 July 2017

Nucleic Acids Research

1 reference

3 July 2017

33

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3 July 2017

Web Server issue

1 reference

3 July 2017

W616-20

1 reference

BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments.

3 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Bioconductor: open software development for computational biology and bioinformatics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

MATCH: A tool for searching transcription factor binding sites in DNA sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Gene ontology: tool for the unification of biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

The KEGG resource for deciphering the genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Gene expression profiling predicts clinical outcome of breast cancer

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

The InterPro database, 2003 brings increased coverage and new features

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Gene-expression profiles predict survival of patients with lung adenocarcinoma

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

TRANSFAC: an integrated system for gene expression regulation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

DNMAD: web-based diagnosis and normalization for microarray data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

New challenges in gene expression data analysis and the extended GEPAS

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Genomic microarrays in human genetic disease and cancer

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

GEPAS: A web-based resource for microarray gene expression data analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Statistical Issues in cDNA Microarray Data Analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Gene expression data preprocessing.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Selection bias in gene extraction on the basis of microarray gene-expression data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Assembly of microarrays for genome-wide measurement of DNA copy number

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

A hierarchical unsupervised growing neural network for clustering gene expression patterns

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Expression profiling--best practices for data generation and interpretation in clinical trials

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Combining hierarchical clustering and self-organizing maps for exploratory analysis of gene expression patterns.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160260

Phylogenetic Reconstruction Using an Unsupervised Growing Neural Network That Adopts the Topology of a Phylogenetic Tree

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15980548

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKI500

1 reference

journals/nar/VaquerizasCYCMDAHD05

3 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

0 references

1 reference

PubMed ID

15980548