EXPANDER--an integrative program suite for microarray data analysis (Q24814200)

Europe PubMed Central

title

EXPANDER--an integrative program suite for microarray data analysis (English)

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6

Roded Sharan

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Amos Tanay

3

object named as

Amos Tanay

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Ron Shamir

1

object named as

Ron Shamir

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Ran Elkon

8

object named as

Ran Elkon

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author name string

Adi Maron-Katz

2

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Chaim Linhart

4

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Israel Steinfeld

5

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Yosef Shiloh

Entrez Gene: gene-centered information at NCBI

7

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language of work or name

English

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publication date

2005

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published in

BMC Bioinformatics

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volume

6

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issue

1

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page(s)

232

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cites work

1 reference

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7 April 2017

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Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data

7 April 2017

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Gene ontology: tool for the unification of biology

7 April 2017

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Cluster analysis and display of genome-wide expression patterns

7 April 2017

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

7 April 2017

1 reference

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

7 April 2017

1 reference

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Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters

7 April 2017

1 reference

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Systematic determination of genetic network architecture

7 April 2017

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FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

7 April 2017

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Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms

7 April 2017

1 reference

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Variance stabilization applied to microarray data calibration and to the quantification of differential expression

7 April 2017

1 reference

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Identification of genes periodically expressed in the human cell cycle and their expression in tumors

7 April 2017

1 reference

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Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

7 April 2017

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New challenges in gene expression data analysis and the extended GEPAS

7 April 2017

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ArrayPipe: a flexible processing pipeline for microarray data

28 September 2017

1 reference

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Diverse and specific gene expression responses to stresses in cultured human cells

28 September 2017

1 reference

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CLICK and EXPANDER: a system for clustering and visualizing gene expression data

28 September 2017

1 reference

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INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis

28 September 2017

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Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells

28 September 2017

1 reference

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Toucan: deciphering the cis-regulatory logic of coregulated genes.

28 September 2017

1 reference

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Discovering statistically significant biclusters in gene expression data

28 September 2017

1 reference

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Cluster analysis and its applications to gene expression data.

28 September 2017

1 reference

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Normalization strategies for cDNA microarrays

28 September 2017

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Computer-assisted identification of cell cycle-related genes: new targets for E2F transcription factors

28 September 2017

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CLICK: a clustering algorithm with applications to gene expression analysis.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1261157

28 November 2018

Identifiers

DOI

10.1186/1471-2105-6-232

1 reference

journals/bmcbi/ShamirMTLSSSE05

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1028486092

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1 reference

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PubMed publication ID

16176576

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