Curved DNA molecules migrate anomalously slowly in free solution (Q24816966)

4 July 2017

title

Curved DNA molecules migrate anomalously slowly in free solution (English)

1 reference

4 July 2017

Earle Stellwagen

1

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4 July 2017

Yongjun Lu

series ordinal

2

1 reference

4 July 2017

Nancy C Stellwagen

series ordinal

3

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4 July 2017

language of work or name

English

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publication date

5 August 2005

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4 July 2017

published in

Nucleic Acids Research

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4 July 2017

volume

33

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4 July 2017

issue

14

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4 July 2017

page(s)

4425-4432

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The contribution of phosphate-phosphate repulsions to the free energy of DNA bending

4 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Bent helical structure in kinetoplast DNA.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Intrinsic curvature in the VP1 gene of SV40: comparison of solution and gel results

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Preferential counterion binding to A-tract DNA oligomers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Improved quantitation of DNA curvature using ligation ladders.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Effects of diaminopurine and inosine substitutions on A-tract induced DNA curvature. Importance of the 3'-A-tract junction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

The locus of sequence-directed and protein-induced DNA bending

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Computer modelling of DNA structures involved in chromosome maintenance

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Calibration of DNA curvature and a unified description of sequence-directed bending

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Estimation of polyacrylamide gel pore size from Ferguson plots of linear DNA fragments. II. Comparison of gels with different crosslinker concentrations, added agarose and added linear polyacrylamide

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

DNA mobility anomalies are determined primarily by polyacrylamide gel concentration, not gel pore size

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

The intrinsic curvature of DNA in solution.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Unique positioning of reconstituted nucleosomes occurs in one region of simian virus 40 DNA.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Anomalously slow electrophoretic mobilities of DNA restriction fragments in polyacrylamide gels are not eliminated by increasing the gel pore size

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Location of nucleosomes in simian virus 40 chromatin

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Estimation of polyacrylamide gel pore size from Ferguson plots of normal and anomalously migrating DNA fragments. I. Gels containing 3% N,N'-methylenebisacrylamide

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Unified Description of Electrophoresis and Diffusion for DNA and Other Polyions

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

DNA persistence length revisited

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Anomalous electrophoresis of deoxyribonucleic acid restriction fragments on polyacrylamide gels

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183105

Evidence from base-pair kinetics for two types of adenine tract structures in solution: their relation to DNA curvature

28 November 2018

1 reference

12 December 2020

Free solution mobility of small single‐stranded oligonucleotides with variable charge densities

1 reference

12 December 2020

The free solution mobility of DNA

1 reference

12 December 2020

The unusual conformation adopted by the adenine tracts in kinetoplast DNA

1 reference

12 December 2020

A semi-empirical approach to the modeling of the electrophoretic mobility in free solution: Application to polystyrenesulfonates of various sulfonation rates

1 reference

12 December 2020

Sequence-directed curvature of DNA

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKI748

1 reference

4 July 2017

1 reference

4 July 2017

1 reference