A new NMR solution structure of the SL1 HIV-1Lai loop-loop dimer (Q25255880)

2

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Fabienne Brulé

3

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Jacques Paoletti

4

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Gérard Lancelot

Efficient encapsidation of human immunodeficiency virus type 1 vectors and further characterization of cis elements required for encapsidation

5

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language of work or name

English

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publication date

2006

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published in

Nucleic Acids Research

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volume

34

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issue

1

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page(s)

343-52

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cites work

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HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin

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Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site

7 April 2017

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Dimer initiation sequence of HIV-1Lai genomic RNA: NMR solution structure of the extended duplex

7 April 2017

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Structure of the dimer initiation complex of HIV-1 genomic RNA

7 April 2017

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The structure of an essential splicing element: stem loop IIa from yeast U2 snRNA

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Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

7 April 2017

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Defining the structure of irregular nucleic acids: conventions and principles

7 April 2017

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7 April 2017

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A proton-coupled dynamic conformational switch in the HIV-1 dimerization initiation site kissing complex

7 April 2017

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Kissing complex-mediated dimerisation of HIV-1 RNA: coupling extended duplex formation to ribozyme cleavage

28 September 2017

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Mechanism of nucleocapsid protein catalyzed structural isomerization of the dimerization initiation site of HIV-1.

28 September 2017

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Exciton interaction in molecular beacons: a sensitive sensor for short range modifications of the nucleic acid structure

28 September 2017

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Genetic analysis reveals epidemiologic patterns in the spread of human immunodeficiency virus

28 September 2017

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Impact of human immunodeficiency virus type 1 RNA dimerization on viral infectivity and of stem-loop B on RNA dimerization and reverse transcription and dissociation of dimerization from packaging

28 September 2017

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Compensatory point mutations in the human immunodeficiency virus type 1 Gag region that are distal from deletion mutations in the dimerization initiation site can restore viral replication

28 September 2017

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Mutant human immunodeficiency virus type 1 genomes with defects in RNA dimerization or encapsidation

28 September 2017

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Evidence that a kissing loop structure facilitates genomic RNA dimerisation in HIV-1.

28 September 2017

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A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

28 September 2017

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Dimerization of human immunodeficiency virus type 1 RNA involves sequences located upstream of the splice donor site.

28 September 2017

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Retrovirus variation and reverse transcription: abnormal strand transfers result in retrovirus genetic variation

28 September 2017

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Two- and three-dimensional HCN experiments for correlating base and sugar resonances in 15N,13C-labeled RNA oligonucleotides

28 September 2017

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28 September 2017

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Genetic consequences of packaging two RNA genomes in one retroviral particle: pseudodiploidy and high rate of genetic recombination

28 September 2017

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Sex and recombination in retroviruses

28 September 2017

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Retroviral Recombination and Reverse Transcription

28 September 2017

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Homologous recombination of copackaged retrovirus RNAs during reverse transcription

28 September 2017

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High-molecular-weight RNAs of AKR, NZB, and wild mouse viruses and avian reticuloendotheliosis virus all have similar dimer structures

28 September 2017

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Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules

28 September 2017

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Dimerization of retroviral genomic RNAs: structural and functional implications

28 September 2017

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Non-canonical interactions in a kissing loop complex: the dimerization initiation site of HIV-1 genomic RNA.

28 September 2017

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Ordered interstrand and intrastrand DNA transfer during reverse transcription

31 May 2018

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The HIV-1(Lai) RNA dimerization. Thermodynamic parameters associated with the transition from the kissing complex to the extended dimer.

31 May 2018

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Structural requirement for the two-step dimerization of human immunodeficiency virus type 1 genome

28 November 2018

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Ultrastructure of HIV-1 genomic RNA

28 November 2018

1 reference

12 December 2020

Measurement of diffusion constants for nucleic acids by NMR

1 reference

12 December 2020

Variant effects of non-native kissing-loop hairpin palindromes on HIV replication and HIV RNA dimerization: role of stem-loop B in HIV replication and HIV RNA dimerization

1 reference

12 December 2020

An efficient procedure for assignment of the proton, carbon and nitrogen resonances in 13C/15N labeled nucleic acids

1 reference

12 December 2020

Dimerization of HIV-1Lai RNA at low ionic strength. An autocomplementary sequence in the 5' leader region is evidenced by an antisense oligonucleotide

1 reference

12 December 2020

Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation

1 reference

12 December 2020

Simultaneous 13C and 15N isotope editing of biomolecular complexes. Application to a mutant lac repressor headpiece DNA complex

1 reference

12 December 2020

A kissing complex together with a stable dimer is involved in the HIV-1Lai RNA dimerization process in vitro

1 reference

12 December 2020

HIV-1 genome dimerization: formation kinetics and thermal stability of dimeric HIV-1Lai RNAs are not improved by the 1-232 and 296-790 regions flanking the kissing-loop domain

1 reference

12 December 2020

Through-bond correlation of adenine H2 and H8 protons in unlabeled DNA fragments by HMBC spectroscopy

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKJ427

1 reference

1 reference

1 reference

PubMed publication ID

16410614

1 reference