An SVM-based system for predicting protein subnuclear localizations (Q25257350)

6 July 2017

title

An SVM-based system for predicting protein subnuclear localizations (English)

1 reference

6 July 2017

Zhengdeng Lei

1

1 reference

6 July 2017

Yang Dai

series ordinal

2

1 reference

6 July 2017

language of work or name

English

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publication date

7 December 2005

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6 July 2017

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6 July 2017

volume

6

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6 July 2017

issue

1

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page(s)

291

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Proteome Analyst: custom predictions with explanations in a web-based tool for high-throughput proteome annotations

6 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions

7 April 2017

1 reference

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Large-scale identification of mammalian proteins localized to nuclear sub-compartments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Mimicking cellular sorting improves prediction of subcellular localization

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis

7 April 2017

1 reference

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Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Prediction of protein secondary structure at better than 70% accuracy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

High mobility of proteins in the mammalian cell nucleus

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Internal organisation of the nucleus: assembly of compartments by macromolecular crowding and the nuclear matrix model

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Predicting protein localization in budding yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Better prediction of sub-cellular localization by combining evolutionary and structural information.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

A new hybrid approach to predict subcellular localization of proteins by incorporating gene ontology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Application of pseudo amino acid composition for predicting protein subcellular location: stochastic signal processing approach.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

The Nuclear Protein Database (NPD): sub-nuclear localisation and functional annotation of the nuclear proteome

28 September 2017

1 reference

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Subcellular location prediction of apoptosis proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

The contribution of nuclear compartmentalization to gene regulation

28 September 2017

1 reference

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Addressing protein localization within the nucleus.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Prediction of protein cellular attributes using pseudo-amino acid composition

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Protein subcellular location prediction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Prediction of Protein Structural Classes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Using complexity measure factor to predict protein subcellular location.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Predicting 22 protein localizations in budding yeast.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Mismatch string kernels for discriminative protein classification

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Using Functional Domain Composition and Support Vector Machines for Prediction of Protein Subcellular Location

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Support vector machine approach for protein subcellular localization prediction

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Multi-class protein fold recognition using support vector machines and neural networks

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325059

Using pseudo amino acid composition to predict protein subcellular location: approached with Lyapunov index, Bessel function, and Chebyshev filter

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16336650

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fine-grained protein fold assignment by support vector machines using generalized npeptide coding schemes and jury voting from multiple-parameter sets

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16336650

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Putting the genome on the map

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16336650

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-6-291

1 reference

6 July 2017

DBLP publication ID

journals/bmcbi/LeiD05

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

6 July 2017

1 reference