Prokaryotic 2-component systems and the OmpR/PhoB superfamily (Q26783533)

1

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Joo-Mi Yoon

2

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Man-Ho Cho

3

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Sang-Won Lee

Canadian Journal of Microbiology

4

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language of work or name

English

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publication date

November 2015

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published in

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volume

61

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issue

11

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page(s)

799-810

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cites work

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A common mechanism of transcriptional activation by the three positive regulators, VirG, PhoB, and OmpR.

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Signal transduction via the multi-step phosphorelay: not necessarily a road less traveled

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Mechanism of activation for transcription factor PhoB suggested by different modes of dimerization in the inactive and active states

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Comprehensive analysis of OmpR phosphorylation, dimerization, and DNA binding supports a canonical model for activation

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Atypical Response Regulator ChxR from Chlamydia trachomatis Is Structurally Poised for DNA Binding

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Robustness and the cycle of phosphorylation and dephosphorylation in a two-component regulatory system.

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Using Structural Information to Change the Phosphotransfer Specificity of a Two-Component Chemotaxis Signalling Complex

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Conformational changes induced by phosphorylation of the FixJ receiver domain

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Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator

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Receiver domain structure and function in response regulator proteins

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The winged-helix DNA-binding motif: another helix-turn-helix takeoff

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Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima

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Three (and more) component regulatory systems - auxiliary regulators of bacterial histidine kinases

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Spontaneous subunit exchange and biochemical evidence for trans-autophosphorylation in a dimer of Escherichia coli histidine kinase (EnvZ).

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A fundamental regulatory mechanism operating through OmpR and DNA topology controls expression of Salmonella pathogenicity islands SPI-1 and SPI-2

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Evolution of two-component signal transduction systems

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Systematic dissection and trajectory-scanning mutagenesis of the molecular interface that ensures specificity of two-component signaling pathways

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Adaptive mutations that prevent crosstalk enable the expansion of paralogous signaling protein families

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Structural insight into partner specificity and phosphoryl transfer in two-component signal transduction

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Residues required for Bacillus subtilis PhoP DNA binding or RNA polymerase interaction: alanine scanning of PhoP effector domain transactivation loop and alpha helix 3.

21 January 2018

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NMR structure of activated CheY

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Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5

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A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase

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A link between dimerization and autophosphorylation of the response regulator PhoB.

21 January 2018

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The complexities of porin genetic regulation.

21 January 2018

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The Cpx stress response system potentiates the fitness and virulence of uropathogenic Escherichia coli.

21 January 2018

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Growth phase-dependent regulation of target gene promoters for binding of the essential orphan response regulator HP1043 of Helicobacter pylori

21 January 2018

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Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain

21 January 2018

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Role of phosphorylated metabolic intermediates in the regulation of glutamine synthetase synthesis in Escherichia coli

21 January 2018

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Cross-talk between the histidine protein kinase VanS and the response regulator PhoB. Characterization and identification of a VanS domain that inhibits activation of PhoB.

21 January 2018

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Purification, reconstitution, and characterization of the CpxRAP envelope stress system of Escherichia coli.

21 January 2018

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Domain Orientation in the Inactive Response Regulator Mycobacterium tuberculosis MtrA Provides a Barrier to Activation † , ‡

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structural classification of bacterial response regulators: diversity of output domains and domain combinations

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Diversity of structure and function of response regulator output domains

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Biological insights from structures of two-component proteins

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Probing kinase and phosphatase activities of two-component systems in vivo with concentration-dependent phosphorylation profiling

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Bacterial response regulators: versatile regulatory strategies from common domains

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

System-level mapping of Escherichia coli response regulator dimerization with FRET hybrids

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The 1.9 A resolution crystal structure of phosphono-CheY, an analogue of the active form of the response regulator, CheY

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Crystal structure of the DNA binding domain of the heat shock transcription factor

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Phosphorylation of three proteins in the signaling pathway of bacterial chemotaxis

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The Atypical Response Regulator Protein ChxR Has Structural Characteristics and Dimer Interface Interactions That Are Unique within the OmpR/PhoB Subfamily

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structure of an atypical orphan response regulator protein supports a new phosphorylation-independent regulatory mechanism

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Genes controlled by the essential YycG/YycF two-component system of Bacillus subtilis revealed through a novel hybrid regulator approach

21 January 2018

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Multimerization of phosphorylated and non-phosphorylated ArcA is necessary for the response regulator function of the Arc two-component signal transduction system

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Connecting two-component regulatory systems by a protein that protects a response regulator from dephosphorylation by its cognate sensor

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structure of a transiently phosphorylated switch in bacterial signal transduction

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The structure of a full-length response regulator from Mycobacterium tuberculosis in a stabilized three-dimensional domain-swapped, activated state

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

ChxR is a transcriptional activator in Chlamydia

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

A response regulator model in a simple sensory system

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The crystal structure of the periplasmic domain ofVibrio parahaemolyticusCpxA

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Hepatocyte nuclear factor 3 alpha belongs to a gene family in mammals that is homologous to the Drosophila homeotic gene fork head

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Specificity in two-component signal transduction pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Crystal structure of an activated response regulator bound to its target

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Phosphorylated aspartate in the structure of a response regulator protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Atypical OmpR/PhoB Subfamily Response Regulator GlnR of Actinomycetes Functions as a Homodimer, Stabilized by the Unphosphorylated Conserved Asp-focused Charge Interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Molecular regulation of antibiotic biosynthesis in streptomyces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The structural basis of the response regulator DrRRA from Deinococcus radiodurans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Phosphorylation of bacterial response regulator proteins by low molecular weight phospho-donors

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The DNA-binding domain of OmpR: crystal structures of a winged helix transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structural relationships in the OmpR family of winged-helix transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The linker region plays an important role in the interdomain communication of the response regulator OmpR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structure of the Response Regulator PhoP from Mycobacterium tuberculosis Reveals a Dimer through the Receiver Domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Signal integration in bacterial two-component regulatory systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structure-Function Studies of DNA Binding Domain of Response Regulator KdpE Reveals Equal Affinity Interactions at DNA Half-Sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Mechanism of autophosphorylation of Escherichia coli nitrogen regulator II (NRII or NtrB): trans-phosphorylation between subunits

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Two-component regulatory systems responsive to environmental stimuli share strongly conserved domains with the nitrogen assimilation regulatory genes ntrB and ntrC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Emergence of vancomycin tolerance in Streptococcus pneumoniae

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structure of the CAP-DNA complex at 2.5 angstroms resolution: a complete picture of the protein-DNA interface

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Communication modules in bacterial signaling proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Solution structure of the DNA-binding domain of NtrC with three alanine substitutions

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The ArcB sensor kinase of Escherichia coli autophosphorylates by an intramolecular reaction.

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Signalling pathways in two-component phosphorelay systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Determinants of specificity in two-component signal transduction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Free energy landscape of activation in a signalling protein at atomic resolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Bacterial regulon evolution: distinct responses and roles for the identical OmpR proteins of Salmonella Typhimurium and Escherichia coli in the acid stress response

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Crystal structure of globular domain of histone H5 and its implications for nucleosome binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Amino acids important for DNA recognition by the response regulator OmpR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Analysis of DNA interactions using single-molecule force spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structural Analysis of the Domain Interface in DrrB, a Response Regulator of the OmpR/PhoB Subfamily

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Crosstalk and the evolution of specificity in two-component signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Phosphorylation-independent activation of the atypical response regulator NblR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Two-component systems and their co-option for eukaryotic signal transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with an Unusual Mode of Binding

21 January 2018

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Binding of the TorR regulator to cis-acting direct repeats activates tor operon expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Protein phosphorylation in the bacterial chemotaxis system

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

PhoP-PhoP interaction at adjacent PhoP binding sites is influenced by protein phosphorylation

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Cross-talk suppression between the CpxA-CpxR and EnvZ-OmpR two-component systems in E. coli

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Two-component signal transduction pathways regulating growth and cell cycle progression in a bacterium: a system-level analysis

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Rewiring the specificity of two-component signal transduction systems

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Three-dimensional structure of CheY, the response regulator of bacterial chemotaxis

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Two-component signal transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Structural analysis and solution studies of the activated regulatory domain of the response regulator ArcA: a symmetric dimer mediated by the alpha4-beta5-alpha5 face

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

A common dimerization interface in bacterial response regulators KdpE and TorR.

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Allosteric activation of bacterial response regulators: the role of the cognate histidine kinase beyond phosphorylation

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

The MiST2 database: a comprehensive genomics resource on microbial signal transduction

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

One-component systems dominate signal transduction in prokaryotes

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

A network of molecular switches controls the activation of the two-component response regulator NtrC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Evidence against the "Y-T coupling" mechanism of activation in the response regulator NtrC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Small non-coding RNAs and the bacterial outer membrane

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Interdomain linkers of homologous response regulators determine their mechanism of action

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Autoregulation of antibiotic biosynthesis by binding of the end product to an atypical response regulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Gene regulation by phosphate in enteric bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Identification of direct residue contacts in protein-protein interaction by message passing

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Histidine kinases and response regulator proteins in two-component signaling systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Crystal structure of the catalytic domain of the chemotaxis receptor methylesterase, CheB

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains

21 January 2018

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Optimization of specificity in a cellular protein interaction network by negative selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

Insights into the mechanism of activation of the phosphorylation-independent response regulator NblR. Role of residues Cys69 and Cys96

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Transcriptional autoregulation by Mycobacterium tuberculosis PhoP involves recognition of novel direct repeat sequences in the regulatory region of the promoter

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Tuning of the porin expression under anaerobic growth conditions by his-to-Asp cross-phosphorelay through both the EnvZ-osmosensor and ArcB-anaerosensor in Escherichia coli

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Multiple histidine kinases regulate entry into stationary phase and sporulation in Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Reverse phosphotransfer from OmpR to EnvZ in a kinase-/phosphatase+ mutant of EnvZ (EnvZ.N347D), a bifunctional signal transducer of Escherichia coli

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Evolution of Prokaryotic Two-Component System Signaling Pathways: Gene Fusions and Fissions

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Two-state allosteric behavior in a single-domain signaling protein

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https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Mutations that alter the kinase and phosphatase activities of the two-component sensor EnvZ.

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021

Two-component signal transduction in Bacillus subtilis: how one organism sees its world.

1 reference

https://api.crossref.org/works/10.1139%2FCJM-2015-0345

7 January 2021