Implementation of linked data in the life sciences at BioHackathon 2011 (Q26864709)

1

0 references

Toshiaki Katayama

15

object named as

Toshiaki Katayama

1 reference

3

Mizuki Morita

1 reference

4

Yoshinobu Igarashi

1 reference

Akira R Kinjo

2

1 reference

Yi-an Chen

5

1 reference

Yasumasa Shigemoto

6

1 reference

Takatomo Fujisawa

7

1 reference

Yukie Akune

8

1 reference

Takeo Katoda

9

1 reference

Anna Kokubu

10

1 reference

Takaaki Mori

11

1 reference

Mitsuteru Nakao

12

1 reference

Shinobu Okamoto

14

1 reference

Soichi Ogishima

16

1 reference

language of work or name

1 reference

2015

1 reference

Journal of Biomedical Semantics

published in

1 reference

volume

6

1 reference

issue

1

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page(s)

3

1 reference

describes a project that uses

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

GlycomeDB--a unified database for carbohydrate structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

PROSITE, a protein domain database for functional characterization and annotation

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

MIRIAM Resources: tools to generate and resolve robust cross-references in Systems Biology

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

LMSD: LIPID MAPS structure database

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

The Universal Protein Resource (UniProt)

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

Bio2RDF: Towards a mashup to build bioinformatics knowledge systems

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

The EBI RDF platform: linked open data for the life sciences

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

KEGG as a glycome informatics resource

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

Building a biomedical ontology recommender web service

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

BioPortal: ontologies and integrated data resources at the click of a mouse

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

McKusick's Online Mendelian Inheritance in Man (OMIM)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

Protein Data Bank Japan (PDBj): maintaining a structural data archive and resource description framework format

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

BioMart Central Portal: an open database network for the biological community

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

BioMart: a data federation framework for large collaborative projects

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

Challenges and opportunities in mining neuroscience data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

The RINGS resource for glycome informatics analysis and data mining on the Web.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

BioGateway: a semantic systems biology tool for the life sciences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

Structures and mechanisms of glycosyltransferases

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

PDBML: the representation of archival macromolecular structure data in XML.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

STAR/mmCIF: an ontology for macromolecular structure

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

BioMart: driving a paradigm change in biological data management

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4429360

[Lipid database "LipidBank" and international collaboration]

28 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/25973165

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Emerging practices for mapping and linking life sciences data using RDF — A case series

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1016/J.WEBSEM.2012.02.003

1 January 2022

Identifiers

DOI

10.1186/2041-1480-6-3

1 reference

journals/biomedsem/Aoki-KinoshitaK15

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/2041-1480-6-3

1 reference

1 reference

PubMed publication ID

25973165

1 reference