Classifying the topology of AHL-driven quorum sensing circuits in proteobacterial genomes (Q26996408)

Kumari Sonal Choudhary

2

1 reference

Bruna Goncalves Coutinho

3

1 reference

Sanjarbek Hudaiberdiev

4

1 reference

Borisz Galbáts

5

1 reference

Vittorio Venturi

6

1 reference

Sándor Pongor

7

1 reference

language of work or name

1 reference

2012

1 reference

27 April 2012

3 references

2 November 2019

2 September 2020

28 October 2022

4 references

2 November 2019

2 September 2020

28 October 2022

12

1 reference

page(s)

5432-44

1 reference

issue

5

1 reference

Creative Commons Attribution

copyright license

3 references

2 November 2019

2 September 2020

28 October 2022

0 references

Cellular Control of the Synthesis and Activity of the Bacterial Luminescent System

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum sensing in bacteria: the LuxR-LuxI family of cell density-responsive transcriptional regulators

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

RsaL, a novel repressor of virulence gene expression in Pseudomonas aeruginosa

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Inter-kingdom signaling: chemical language between bacteria and host

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

The Pseudomonas quorum-sensing regulator RsaL belongs to the tetrahelical superclass of H-T-H proteins

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum sensing: cell-to-cell communication in bacteria

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Network motifs: simple building blocks of complex networks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Network motifs: theory and experimental approaches

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

The PROSITE database, its status in 2002

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Regulation of gene expression by cell-to-cell communication: acyl-homoserine lactone quorum sensing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Chromosomal Arrangement of AHL-Driven Quorum Sensing Circuits in Pseudomonas

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

The virtue of temperance: built-in negative regulators of quorum sensing in Pseudomonas

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Isovaleryl-homoserine lactone, an unusual branched-chain quorum-sensing signal from the soybean symbiont Bradyrhizobium japonicum

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Aryl-homoserine lactone quorum sensing in stem-nodulating photosynthetic bradyrhizobia

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Understanding bacterial cell-cell communication with computational modeling

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

MPI-PHYLIP: parallelizing computationally intensive phylogenetic analysis routines for the analysis of large protein families

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Design principles of the bacterial quorum sensing gene networks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Bacterial antisense RNAs: how many are there, and what are they doing?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

LuxR-type quorum-sensing regulators that are detached from common scents

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Functional motifs in biochemical reaction networks.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Future research trends in the major chemical language of bacteria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

LuxR-family 'solos': bachelor sensors/regulators of signalling molecules

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Design principles of biochemical oscillators

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum sensing inhibitory drugs as next generation antimicrobials: worth the effort?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Cell-cell communication in the plant pathogen Agrobacterium tumefaciens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum-sensing regulation in rhizobia and its role in symbiotic interactions with legumes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Erwinia carotovora subspecies produce duplicate variants of ExpR, LuxR homologs that activate rsmA transcription but differ in their interactions with N-acylhomoserine lactone signals

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Three parallel quorum-sensing systems regulate gene expression in Vibrio harveyi.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Programmable cells: interfacing natural and engineered gene networks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Connected gene neighborhoods in prokaryotic genomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum-sensing in Gram-negative bacteria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Stability and evolution of overlapping genes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

N-acyl homoserine lactone binding to the CarR receptor determines quorum-sensing specificity in Erwinia.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Census and consensus in bacterial ecosystems: the LuxR-LuxI family of quorum-sensing transcriptional regulators

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

A LuxR-LuxI type regulatory system activates Agrobacterium Ti plasmid conjugal transfer in the presence of a plant tumor metabolite

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Evidence that the N-terminal region of the Vibrio fischeri LuxR protein constitutes an autoinducer-binding domain

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Structural identification of autoinducer of Photobacterium fischeri luciferase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Bacterial bioluminescence: isolation and genetic analysis of functions from Vibrio fischeri

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Activity of the Rhodopseudomonas palustris p-coumaroyl-homoserine lactone-responsive transcription factor RpaR.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum-sensing-dependent regulation of biosynthesis of the polyketide antibiotic mupirocin in Pseudomonas fluorescens NCIMB 10586.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Enzymatic synthesis of a quorum-sensing autoinducer through use of defined substrates.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386692

Quorum-sensing antiactivator TraM forms a dimer that dissociates to inhibit TraR.

31 May 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

Dimerization properties of TraM, the antiactivator that modulates TraR-mediated quorum-dependent expression of the Ti plasmid tra genes

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

The plant pathogen Pseudomonas fuscovaginae contains two conserved quorum sensing systems involved in virulence and negatively regulated by RsaL and the novel regulator RsaM.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

Succinic semialdehyde couples stress response to quorum-sensing signal decay in Agrobacterium tumefaciens.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

Cooperation of two distinct ExpR regulators controls quorum sensing specificity and virulence in the plant pathogen Erwinia carotovora.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

A new class of homoserine lactone quorum-sensing signals.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

A distinct QscR regulon in the Pseudomonas aeruginosa quorum-sensing circuit

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

Quorum sensing in Cyanobacteria: N-octanoyl-homoserine lactone release and response, by the epilithic colonial cyanobacterium Gloeothece PCC6909.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

Organisation of the S10, spc and alpha ribosomal protein gene clusters in prokaryotic genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

AHL-driven quorum-sensing circuits: their frequency and function among the Proteobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FS120505432

21 January 2018

Identifiers

DOI

10.3390/S120505432

1 reference

journals/sensors/GelencserCCHGVP12

3973789

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_ljfiiyzeyrfr5bxzbyxwzj6r74

28 January 2021

Fatcat ID

0 references

3973789

1 reference

1 reference

1 reference