Feedback loops and reciprocal regulation: recurring motifs in the systems biology of the cell cycle (Q27021741)

Crossref

language of work or name

1 reference

December 2013

1 reference

Current Opinion in Cell Biology

published in

1 reference

volume

25

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issue

6

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page(s)

676-86

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Cascades of multisite phosphorylation control Sic1 destruction at the onset of S phase

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Distinct interactions select and maintain a specific cell fate

21 March 2017

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Ultrasensitivity in the Regulation of Cdc25C by Cdk1

21 March 2017

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Positive feedback of G1 cyclins ensures coherent cell cycle entry

21 March 2017

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Positive feedback sharpens the anaphase switch

21 March 2017

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Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts

21 March 2017

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The G(1) cyclin Cln3 promotes cell cycle entry via the transcription factor Swi6

21 March 2017

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A human homologue of the checkpoint kinase Cds1 directly inhibits Cdc25 phosphatase

21 March 2017

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Human Myt1 Is a Cell Cycle-regulated Kinase That Inhibits Cdc2 but Not Cdk2 Activity

21 March 2017

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Human Wee1 kinase inhibits cell division by phosphorylating p34cdc2 exclusively on Tyr15

21 March 2017

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Cell cycle regulation of human WEE1

21 March 2017

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Daughter-specific transcription factors regulate cell size control in budding yeast

21 March 2017

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CDK activity antagonizes Whi5, an inhibitor of G1/S transcription in yeast

21 March 2017

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Cln3 activates G1-specific transcription via phosphorylation of the SBF bound repressor Whi5.

21 March 2017

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Inhibitory phosphorylation of the APC regulator Hct1 is controlled by the kinase Cdc28 and the phosphatase Cdc14.

21 March 2017

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The B-type cyclin kinase inhibitor p40SIC1 controls the G1 to S transition in S. cerevisiae

21 March 2017

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Cyclin is degraded by the ubiquitin pathway

21 March 2017

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A positive-feedback-based bistable 'memory module' that governs a cell fate decision

21 March 2017

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Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication

21 March 2017

1 reference

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Construction of a genetic toggle switch in Escherichia coli

21 March 2017

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Cyclin: a protein specified by maternal mRNA in sea urchin eggs that is destroyed at each cleavage division

21 March 2017

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A mitotic phosphorylation feedback network connects Cdk1, Plk1, 53BP1, and Chk2 to inactivate the G(2)/M DNA damage checkpoint

21 March 2017

1 reference

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The fission yeast homeodomain protein Yox1p binds to MBF and confines MBF-dependent cell-cycle transcription to G1-S via negative feedback

21 March 2017

1 reference

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A synthetic oscillatory network of transcriptional regulators

21 March 2017

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Network motifs: theory and experimental approaches

7 April 2017

1 reference

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Proteomic screen finds pSer/pThr-binding domain localizing Plk1 to mitotic substrates

7 April 2017

1 reference

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Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability

7 April 2017

1 reference

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Engineering stability in gene networks by autoregulation

7 April 2017

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Complementation used to clone a human homologue of the fission yeast cell cycle control gene cdc2

7 April 2017

1 reference

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Negative regulation of mitosis by wee1+, a gene encoding a protein kinase homolog

7 April 2017

1 reference

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Tyrosine phosphorylation of the fission yeast cdc2+ protein kinase regulates entry into mitosis

7 April 2017

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Mitotic trigger waves and the spatial coordination of the Xenopus cell cycle

7 April 2017

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The Cdk1-APC/C cell cycle oscillator circuit functions as a time-delayed, ultrasensitive switch

28 September 2017

1 reference

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Signaling pathways that regulate cell division

28 September 2017

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Spatial positive feedback at the onset of mitosis

28 September 2017

1 reference

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Bistability, bifurcations, and Waddington's epigenetic landscape

28 September 2017

1 reference

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Protein phosphatases and their regulation in the control of mitosis

28 September 2017

1 reference

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Cyclin-dependent kinases are regulators and effectors of oscillations driven by a transcription factor network

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Commitment to a cellular transition precedes genome-wide transcriptional change.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

A phosphatase threshold sets the level of Cdk1 activity in early mitosis in budding yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Modeling the cell cycle: why do certain circuits oscillate?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Greatwall phosphorylates an inhibitor of protein phosphatase 2A that is essential for mitosis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Reliability of transcriptional cycles and the yeast cell-cycle oscillator

28 September 2017

1 reference

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Functional motifs in biochemical reaction networks.

28 September 2017

1 reference

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Loss of the mammalian APC/C activator FZR1 shortens G1 and lengthens S phase but has little effect on exit from mitosis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

miR-449a and miR-449b are direct transcriptional targets of E2F1 and negatively regulate pRb-E2F1 activity through a feedback loop by targeting CDK6 and CDC25A.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

The M phase kinase Greatwall (Gwl) promotes inactivation of PP2A/B55delta, a phosphatase directed against CDK phosphosites

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Design principles of biochemical oscillators

28 September 2017

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Rapid cycling and precocious termination of G1 phase in cells expressing CDK1AF.

28 September 2017

1 reference

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Global control of cell-cycle transcription by coupled CDK and network oscillators

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

A bistable Rb-E2F switch underlies the restriction point

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Feedback regulation of opposing enzymes generates robust, all-or-none bistable responses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Substrate competition as a source of ultrasensitivity in the inactivation of Wee1.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Systems-level dissection of the cell-cycle oscillator: bypassing positive feedback produces damped oscillations

28 September 2017

1 reference

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Teleonomic mechanisms in cellular metabolism, growth, and differentiation

28 September 2017

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Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible

28 September 2017

1 reference

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Building a cell cycle oscillator: hysteresis and bistability in the activation of Cdc2.

28 September 2017

1 reference

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Negative autoregulation speeds the response times of transcription networks

28 September 2017

1 reference

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Men and sin: what's the difference?

28 September 2017

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Positive regulation of Wee1 by Chk1 and 14-3-3 proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Control of mitotic transitions by the anaphase-promoting complex

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Cdc25 inhibited in vivo and in vitro by checkpoint kinases Cds1 and Chk1

28 September 2017

1 reference

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The Xenopus Chk1 protein kinase mediates a caffeine-sensitive pathway of checkpoint control in cell-free extracts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

14-3-3 proteins act as negative regulators of the mitotic inducer Cdc25 in Xenopus egg extracts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Phosphorylation-dependent degradation of the cyclin-dependent kinase inhibitor p27

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Phosphorylation and activation of human cdc25-C by cdc2--cyclin B and its involvement in the self-amplification of MPF at mitosis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Role of Swi4 in cell cycle regulation of CLN2 expression

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Cell cycle regulation of a Xenopus Wee1-like kinase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Cell cycle dynamics of an M-phase-specific cytoplasmic factor in Xenopus laevis oocytes and eggs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Purification of maturation-promoting factor, an intracellular regulator of early mitotic events

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

The role of cyclin synthesis and degradation in the control of maturation promoting factor activity

28 September 2017

1 reference

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Cyclin synthesis drives the early embryonic cell cycle

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

MPF from starfish oocytes at first meiotic metaphase is a heterodimer containing one molecule of cdc2 and one molecule of cyclin B

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Cyclin is a component of maturation-promoting factor from Xenopus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Regulated activity of PP2A-B55 delta is crucial for controlling entry into and exit from mitosis in Xenopus egg extracts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Robust, tunable biological oscillations from interlinked positive and negative feedback loops.

31 May 2018

1 reference

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Irreversible cell-cycle transitions are due to systems-level feedback.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Greatwall kinase participates in the Cdc2 autoregulatory loop in Xenopus egg extracts

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Evidence that a free-running oscillator drives G1 events in the budding yeast cell cycle

31 May 2018

1 reference

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Myt1: a Wee1-type kinase that phosphorylates Cdc2 on residue Thr14.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Cyclin E-CDK2 is a regulator of p27Kip1.

31 May 2018

1 reference

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Numerical analysis of a comprehensive model of M-phase control in Xenopus oocyte extracts and intact embryos.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Amplification and adaptation in regulatory and sensory systems.

31 May 2018

1 reference

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Mathematics of cellular control processes I. Negative feedback to one gene

31 May 2018

1 reference

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The Xenopus cdc2 protein is a component of MPF, a cytoplasmic regulator of mitosis

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Positive autoregulation of the myogenic determination gene MyoD1.

31 May 2018

1 reference

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Cyclin activation of p34cdc2.

31 May 2018

1 reference

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Regulation of the cdc25 protein during the cell cycle in Xenopus extracts

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

The role of APC/C inhibitor Emi2/XErp1 in oscillatory dynamics of early embryonic cell cycles

31 May 2018

1 reference

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The APC/C inhibitor XErp1/Emi2 is essential for Xenopus early embryonic divisions.

28 November 2018

1 reference

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Cubism and the cell cycle: the many faces of the APC/C.

28 November 2018

1 reference

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Stable periodicity and negative circuits in differential systems.

28 November 2018

1 reference

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Synergistic function of E2F7 and E2F8 is essential for cell survival and embryonic development.

28 November 2018

1 reference

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The ubiquitin ligase APC(Cdh1) is required to maintain genome integrity in primary human cells.

28 November 2018

1 reference

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28 November 2018

1 reference

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Purification and molecular cloning of Plx1, a Cdc25-regulatory kinase from Xenopus egg extracts

28 November 2018

1 reference

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FAR1 links the signal transduction pathway to the cell cycle machinery in yeast.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Negative regulation of FAR1 at the Start of the yeast cell cycle

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Myt1: a membrane-associated inhibitory kinase that phosphorylates Cdc2 on both threonine-14 and tyrosine-15.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Triggering of cyclin degradation in interphase extracts of amphibian eggs by cdc2 kinase

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3836843

Functionally homologous cell cycle control genes in budding and fission yeast

28 November 2018

1 reference

12 December 2020

The polo-like kinase 1 regulates CDC25B-dependent mitosis entry

1 reference

12 December 2020

The Polo-like kinase Plx1 is a component of the MPF amplification loop at the G2/M-phase transition of the cell cycle in Xenopus eggs

1 reference

12 December 2020

Driving the cell cycle with a minimal CDK control network

1 reference

12 December 2020

Purified maturation-promoting factor contains the product of a Xenopus homolog of the fission yeast cell cycle control gene cdc2+

1 reference

12 December 2020

Purification of MPF from starfish: identification as the H1 histone kinase p34cdc2 and a possible mechanism for its periodic activation

1 reference

12 December 2020

Cell fates as high-dimensional attractor states of a complex gene regulatory network

1 reference

12 December 2020