Noise contributions in an inducible genetic switch: a whole-cell simulation study (Q27333733)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21423716%20AND%20SRC:MED&resulttype=core&format=json

26 January 2020

title

Noise contributions in an inducible genetic switch: a whole-cell simulation study (English)

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26 January 2020

2

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26 January 2020

Zaida Luthey-Schulten

5

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26 January 2020

author name string

Elijah Roberts

1

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26 January 2020

Julio O Ortiz

3

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26 January 2020

Wolfgang Baumeister

4

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26 January 2020

language of work or name

English

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publication date

10 March 2011

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PLOS Computational Biology

26 January 2020

published in

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26 January 2020

volume

7

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26 January 2020

issue

3

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26 January 2020

page(s)

e1002010

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Creative Commons Attribution 4.0 International

26 January 2020

copyright license

start time

10 March 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Spatio-temporal correlations can drastically change the response of a MAPK pathway

28 September 2017

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A new multicompartmental reaction-diffusion modeling method links transient membrane attachment of E. coli MinE to E-ring formation

28 September 2017

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Visual proteomics of the human pathogen Leptospira interrogans

28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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Stochastic reaction-diffusion simulation with MesoRD.

28 September 2017

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Membrane integration of E. coli model membrane proteins

28 September 2017

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Why is transcription coupled to translation in bacteria?

28 September 2017

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Stochastic gene expression in fluctuating environments

28 September 2017

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Summing up the noise in gene networks

28 September 2017

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Detailed map of a cis-regulatory input function

28 September 2017

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28 September 2017

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28 September 2017

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Single mRNA molecules demonstrate probabilistic movement in living mammalian cells

28 September 2017

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Noise-based switches and amplifiers for gene expression

28 September 2017

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Binding of an inducer to the lac repressor

28 September 2017

1 reference

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The three operators of the lac operon cooperate in repression

28 September 2017

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Binding of synthetic lactose operator DNAs to lactose repressors

28 September 2017

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Morphological analysis of the division cycle of two Escherichia coli substrains during slow growth

28 September 2017

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Interaction of effecting ligands with lac repressor and repressor-operator complex

28 September 2017

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A stochastic single-molecule event triggers phenotype switching of a bacterial cell

28 September 2017

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Anomalous diffusion of proteins due to molecular crowding.

2 June 2018

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FtsY, the prokaryotic signal recognition particle receptor homologue, is essential for biogenesis of membrane proteins.

2 June 2018

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Quantitative aspects of active transport by the lactose transport system of Escherichia coli.

2 June 2018

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Macromolecular binding equilibria in the lac repressor system: studies using high-pressure fluorescence spectroscopy.

2 June 2018

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Fast measurement of galactoside transport by lactose permease.

2 June 2018

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Stochastic switching as a survival strategy in fluctuating environments

19 June 2018

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Probing gene expression in live cells, one protein molecule at a time.

21 January 2018

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Diffusion of transcription factors can drastically enhance the noise in gene expression

21 January 2018

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Reaction Brownian dynamics and the effect of spatial fluctuations on the gain of a push-pull network.

21 January 2018

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Mapping 70S ribosomes in intact cells by cryoelectron tomography and pattern recognition.

21 January 2018

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Three-dimensional analysis of the structure and ecology of a novel, ultra-small archaeon.

21 January 2018

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Physical nature of bacterial cytoplasm.

21 January 2018

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Stochastic simulation of chemical reactions with spatial resolution and single molecule detail.

21 January 2018

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Green's-function reaction dynamics: a particle-based approach for simulating biochemical networks in time and space.

21 January 2018

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Spatial stochastic modelling of the phosphoenolpyruvate-dependent phosphotransferase (PTS) pathway in Escherichia coli.

21 January 2018

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Mathematical model of the lac operon: inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose.

21 January 2018

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Effect of DNA looping on the induction kinetics of the lac operon.

21 January 2018

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Bistable behavior in a model of the lac operon in Escherichia coli with variable growth rate

21 January 2018

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The diffusive influx and carrier efflux have a strong effect on the bistability of the lac operon in Escherichia coli

21 January 2018

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The functional integration of a polytopic membrane protein of Escherichia coli is dependent on the bacterial signal-recognition particle.

21 January 2018

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Single molecule tracking of quantum dot-labeled mRNAs in a cell nucleus.

21 January 2018

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Equilibrium binding of inducer to lac repressor.operator DNA complex.

21 January 2018

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Stochastic switching in gene networks can occur by a single-molecule event or many molecular steps

27 November 2018

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12 December 2020

Kinetic studies of inducer binding to lac repressor.operator complex

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12 December 2020

Linking stochastic dynamics to population distribution: an analytical framework of gene expression

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12 December 2020

Kinetic studies on galactoside permease of Escherichia coli

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The β-galactoside permease ofEscherichia coli

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12 December 2020

10.1371/JOURNAL.PCBI.1002010

Identifiers

DOI

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3693317

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21423716%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/RobertsMOBL11

26 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

OpenCitations bibliographic resource ID

28 January 2021

3693317

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21423716%20AND%20SRC:MED&resulttype=core&format=json

26 January 2020

1 reference