SnoRNA-binding rRNA-processing protein IMP4 YNL075W (Q27549972)

fungal protein found in Saccharomyces cerevisiae S288c

snoRNA-binding rRNA-processing protein IMP4
YNL075W
IMP4

Language	Label	Description	Also known as
English	SnoRNA-binding rRNA-processing protein IMP4 YNL075W	fungal protein found in Saccharomyces cerevisiae S288c	snoRNA-binding rRNA-processing protein IMP4 YNL075W IMP4

Statements

1 reference

25 May 2022

1 reference

19 January 2017

Brix domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

found in taxon

Saccharomyces cerevisiae S288c

1 reference

25 May 2022

1 reference

25 May 2022

rRNA primary transcript binding

determination method or standard

IPI

1 reference

retrieved

14 February 2019

stated in

The sigma(70)-like motif: a eukaryotic RNA binding domain unique to a superfamily of proteins required for ribosome biogenesis

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

snoRNA binding

determination method or standard

IDA

1 reference

retrieved

27 March 2018

stated in

Imp3p and Imp4p mediate formation of essential U3-precursor rRNA (pre-rRNA) duplexes, possibly to recruit the small subunit processome to the pre-rRNA.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=P53941&geneProductId=UniProtKB:P53941

determination method or standard

IDA

single-stranded telomeric DNA binding

determination method or standard

IDA

1 reference

retrieved

9 May 2019

stated in

The U3 small nucleolar ribonucleoprotein component Imp4p is a telomeric DNA-binding protein

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IDA

protein binding

determination method or standard

IPI

6 references

retrieved

9 May 2019

stated in

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

retrieved

9 May 2019

stated in

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

retrieved

9 May 2019

stated in

The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

retrieved

9 May 2019

stated in

The SSU processome interactome in Saccharomyces cerevisiae reveals novel protein subcomplexes

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

retrieved

9 May 2019

stated in

Proteome survey reveals modularity of the yeast cell machinery

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

retrieved

9 May 2019

stated in

Imp3p and Imp4p, two specific components of the U3 small nucleolar ribonucleoprotein that are essential for pre-18S rRNA processing

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IPI

snoRNA binding

determination method or standard

IBA

IDA

rRNA primary transcript binding

determination method or standard

IBA

IPI

rRNA primary transcript binding

determination method or standard

IDA

1 reference

retrieved

9 May 2019

stated in

The sigma(70)-like motif: a eukaryotic RNA binding domain unique to a superfamily of proteins required for ribosome biogenesis

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IDA

cell component

small-subunit processome

determination method or standard

IDA

nucleus

determination method or standard

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IEA

Mpp10 complex

determination method or standard

IDA

1 reference

retrieved

27 March 2018

stated in

The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=P53941&geneProductId=UniProtKB:P53941

determination method or standard

IDA

nucleoplasm

determination method or standard

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

TAS

nucleolus

determination method or standard

1 reference

27 March 2018

http://www.ebi.ac.uk/QuickGO/annotations?protein=P53941&geneProductId=UniProtKB:P53941

determination method or standard

IEA

small-subunit processome

determination method or standard

3 references

9 May 2019

Components of an interdependent unit within the SSU processome regulate and mediate its activity.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IDA

retrieved

9 May 2019

stated in

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IDA

retrieved

9 May 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IBA

Mpp10 complex

determination method or standard

IBA

IDA

90S preribosome

determination method or standard

HDA

1 reference

retrieved

9 May 2019

stated in

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

HDA

biological process

ribosomal small subunit biogenesis

determination method or standard

IDA

1 reference

retrieved

9 May 2019

stated in

Imp3 unfolds stem structures in pre-rRNA and U3 snoRNA to form a duplex essential for small subunit processing

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IDA

ribosome biogenesis

determination method or standard

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IEA

rRNA methylation

determination method or standard

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

TAS

rRNA processing

determination method or standard

3 references

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IEA

retrieved

9 May 2019

stated in

Imp3 unfolds stem structures in pre-rRNA and U3 snoRNA to form a duplex essential for small subunit processing

GOA

curator

SGD

Saccharomyces Genome Database ID

S000005019

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

IDA

retrieved

9 May 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53941

determination method or standard

1 reference

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P53941

Identifiers

1 reference

20 March 2022

1 reference

25 May 2022

1 reference

Saccharomyces Genome Database ID

1 reference

20 March 2022

SnoRNA-binding rRNA-processing protein IMP4 YNL075W (Q27549972)

Statements

Identifiers

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SnoRNA-binding rRNA-processing protein IMP4 YNL075W (Q27549972)

Statements

Identifiers

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

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