The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges (Q27620467)

2

0 references

P Walter

3

0 references

R Marquet

4

0 references

B Ehresmann

5

0 references

C Ehresmann

6

0 references

P Dumas

Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules

7

0 references

language of work or name

1 reference

15 November 1999

0 references

published in

Structure

0 references

volume

7

0 references

issue

11

0 references

page(s)

1439-49

0 references

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

RD-114, baboon, and woolly monkey viral RNAs compared in size and structure

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Non-canonical interactions in a kissing loop complex: the dimerization initiation site of HIV-1 genomic RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Structure of the dimer initiation complex of HIV-1 genomic RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Maturation of dimeric viral RNA of Moloney murine leukemia virus.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

NCp7 activates HIV-1Lai RNA dimerization by converting a transient loop-loop complex into a stable dimer

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Crystal structures of an A-form duplex with single-adenosine bulges and a conformational basis for site-specific RNA self-cleavage

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Conformational analysis of single-base bulges in A-form DNA and RNA using a hierarchical approach and energetic evaluation with a continuum solvent model.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

RNA bulge entropies in the unbound state correlate with peptide binding strengths for HIV-1 and BIV TAR RNA because of improved conformational access

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Solution structure of the donor site of a trans-splicing RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Proton NMR and structural features of a 24-nucleotide RNA hairpin

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

A "bulged" double helix in a RNA-protein contact site.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Role of a bulged A residue in a specific RNA-protein interaction

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Crystal structure of an RNA bacteriophage coat protein–operator complex

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Crystal structure of a lead-dependent ribozyme revealing metal binding sites relevant to catalysis

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Crystal structure of a group I ribozyme domain: principles of RNA packing

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Dimer initiation sequence of HIV-1Lai genomic RNA: NMR solution structure of the extended duplex

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

A kissing complex together with a stable dimer is involved in the HIV-1Lai RNA dimerization process in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Salt-dependent conformational transitions in the self-complementary deoxydodecanucleotide d(CGCAATTCGCG): evidence for hairpin formation

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Helix formation by dAT oligomers. I. Hairpin and straight-chain helices.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

RNA secondary structure and binding sites for gag gene products in the 5' packaging signal of human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Hairpin ribozyme cleavage catalyzed by aminoglycoside antibiotics and the polyamine spermine in the absence of metal ions

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Aminoglycoside binding to the hammerhead ribozyme: a general model for the interaction of cationic antibiotics with RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Docking of cationic antibiotics to negatively charged pockets in RNA folds

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

[22] Detecting and overcoming crystal twinning

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Detection and treatment of twinning: an improvement and new results

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

Improved Fourier coefficients for maps using phases from partial structures with errors

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

AMoRe: an automated package for molecular replacement

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

New applications of simulated annealing in X-ray crystallography and solution NMR.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021

DRAWNA: a program for drawing schematic views of nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2980033-7

7 January 2021