Structure of a quinohemoprotein amine dehydrogenase with an uncommon redox cofactor and highly unusual crosslinking (Q27636313)

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0019928

peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0019927

cysteine tryptophylquinone

1 reference

ChEBI release 2020-05-28

S Datta

1

S

Datta

1 reference

20 October 2023

Y Mori

2

Y

Mori

1 reference

20 October 2023

K Takagi

3

K

Takagi

1 reference

20 October 2023

K Kawaguchi

4

K

Kawaguchi

1 reference

20 October 2023

Z W Chen

5

Z W

Chen

1 reference

20 October 2023

T Okajima

6

T

Okajima

1 reference

20 October 2023

S Kuroda

7

S

Kuroda

1 reference

20 October 2023

T Ikeda

8

T

Ikeda

1 reference

20 October 2023

K Kano

9

K

Kano

1 reference

20 October 2023

K Tanizawa

10

K

Tanizawa

1 reference

20 October 2023

F S Mathews

11

F S

Mathews

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 October 2023

language of work or name

English

0 references

publication date

4 December 2001

0 references

published in

0 references

volume

98

0 references

issue

25

0 references

page(s)

14268-73

0 references

cites work

Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Refined crystal structure of methylamine dehydrogenase from Paracoccus denitrificans at 1.75 A resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Catalytic mechanism of the quinoenzyme amine oxidase from Escherichia coli: exploring the reductive half-reaction

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Active site structure of methylamine dehydrogenase: hydrazines identify C6 as the reactive site of the tryptophan-derived quinone cofactor

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Raster3D: photorealistic molecular graphics

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

20 March 2017

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Detection, delineation, measurement and display of cavities in macromolecular structures

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Automated MAD and MIR structure solution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

20 March 2017

https://api.crossref.org/works/10.1073/PNAS.241429098

Improved methods for building protein models in electron density maps and the location of errors in these models

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Stereochemical quality of protein structure coordinates

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

A common export pathway for proteins binding complex redox cofactors?

20 March 2017

1 reference

https://api.crossref.org/works/10.1073/PNAS.241429098

xdlMAPMAN and xdlDATAMAN - programs for reformatting, analysis and manipulation of biomacromolecular electron-density maps and reflection data sets

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Miscellaneous algorithms for density modification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Checking your imagination: applications of the free R value

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Adenosylmethionine-dependent iron-sulfur enzymes: versatile clusters in a radical new role

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

New pathway of amine oxidation respiratory chain of Paracoccus denitrificans IFO 12442.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Automated interpretation of high-energy collision-induced dissociation spectra of singly protonated peptides by 'SeqMS', a software aid for de novo sequencing by tandem mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Function of multiple heme c moieties in intramolecular electron transport and ubiquinone reduction in the quinohemoprotein alcohol dehydrogenase-cytochrome c complex of Gluconobacter suboxydans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Model studies of topa quinone: synthesis and characterization of topa quinone derivatives

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

29 September 2017

Quinoenzymes in biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Quinoprotein-catalysed reactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

A new redox cofactor in eukaryotic enzymes: 6-hydroxydopa at the active site of bovine serum amine oxidase

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

Specific detection of quinoproteins by redox-cycling staining

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64671

A crosslinked cofactor in lysyl oxidase: redox function for amino acid side chains.

2 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Characterization of Quinohemoprotein Amine Dehydrogenase from Pseudomonas putida

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

AMoRe: an automated package for molecular replacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

The iron sulfur protein AtsB is required for posttranslational formation of formylglycine in the Klebsiella sulfatase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Generation of the topa quinone cofactor in bacterial monoamine oxidase by cupric ion-dependent autooxidation of a specific tyrosyl residue.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Galactose Oxidase Pro-Sequence Cleavage and Cofactor Assembly Are Self-Processing Reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

A new cofactor in a prokaryotic enzyme: tryptophan tryptophylquinone as the redox prosthetic group in methylamine dehydrogenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Intermolecular electron transfer from quinoproteins and its relevance to biosensor technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Biochemical and electrochemical characterization of quinohemoprotein amine dehydrogenase from Paracoccus denitrificans

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

[14] Detection of intermediates in tryptophan tryptophylquinone enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Crystallographic investigations of the tryptophan-derived cofactor in the quinoprotein methylamine dehydrogenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

Mutants of Methylobacterium extorquens and Paracoccus denitrificans deficient in c-type cytochrome biogenesis synthesise the methylamine-dehydrogenase polypeptides but cannot assemble the tryptophan-tryptophylquinone group

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241429098

21 January 2018

Identifiers

DOI

10.1073/PNAS.241429098

0 references

0 references

0 references