The nuclease domain of adeno-associated virus rep coordinates replication initiation using two distinct DNA recognition interfaces (Q27643152)

1

0 references

Zhanita N Perez

3

0 references

Robert M Kotin

4

0 references

Fred Dyda

Three-way and four-way junctions in DNA: a conformational viewpoint

5

0 references

publication date

13 February 2004

0 references

published in

Molecular Cell

0 references

volume

13

0 references

issue

3

0 references

page(s)

403-14

0 references

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Identification of nuclear proteins that specifically interact with adeno-associated virus type 2 inverted terminal repeat hairpin DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Rep-mediated nicking of the adeno-associated virus origin requires two biochemical activities, DNA helicase activity and transesterification.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Mechanism of Rep-mediated adeno-associated virus origin nicking

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Natural abundance heteronuclear NMR studies of the T3 mini-loop hairpin in the terminal repeat of the adenoassociated virus 2.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Gene transfer to the nigrostriatal system by hybrid herpes simplex virus/adeno-associated virus amplicon vectors

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Mutational analysis of adeno-associated virus type 2 Rep68 protein endonuclease activity on partially single-stranded substrates

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Sustained correction of X-linked severe combined immunodeficiency by ex vivo gene therapy

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

LMO2-associated clonal T cell proliferation in two patients after gene therapy for SCID-X1

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Structural unity among viral origin binding proteins: crystal structure of the nuclease domain of adeno-associated virus Rep

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

The AAV origin binding protein Rep68 is an ATP-dependent site-specific endonuclease with DNA helicase activity

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Crystal structure of the SF3 helicase from adeno-associated virus type 2

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Site-specific integration by adeno-associated virus

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Structure of the replicative helicase of the oncoprotein SV40 large tumour antigen

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

The recombination signals for adeno-associated virus site-specific integration

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Interaction of the adeno-associated virus Rep protein with a sequence within the A palindrome of the viral terminal repeat.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

AAV serotype 2 vectors preferentially integrate into active genes in mice

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Implementation of molecular replacement in AMoRe

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Site-specific integration mediated by a hybrid adenovirus/adeno-associated virus vector.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

1 reference

7 January 2021

Sequence requirements for binding of Rep68 to the adeno-associated virus terminal repeats

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Targeted integration of adeno-associated virus (AAV) into human chromosome 19

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

HIV-1 integration in the human genome favors active genes and local hotspots

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

The Rep52 gene product of adeno-associated virus is a DNA helicase with 3'-to-5' polarity

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

An adeno-associated virus (AAV) initiator protein, Rep78, catalyzes the cleavage and ligation of single-stranded AAV ori DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Charged-to-alanine scanning mutagenesis of the N-terminal half of adeno-associated virus type 2 Rep78 protein

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Adeno-associated virus (AAV) Rep proteins mediate complex formation between AAV DNA and its integration site in human DNA

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Binding sites for adeno-associated virus Rep proteins within the human genome.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Factors affecting the terminal resolution site endonuclease, helicase, and ATPase activities of adeno-associated virus type 2 Rep proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

A Rep recognition sequence is necessary but not sufficient for nicking of DNA by adeno-associated virus type-2 Rep proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Transcription start regions in the human genome are favored targets for MLV integration

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021

Amino-terminal domain exchange redirects origin-specific interactions of adeno-associated virus rep78 in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900023-1

7 January 2021