H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification (Q27644371)

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English	H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification	scientific article

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scholarly article

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H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification (English)

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corrigendum / erratum

Correction for Wu and Feigon, H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification

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2

object named as

Juli Feigon

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author name string

Haihong Wu

1

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language of work or name

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publication date

17 April 2007

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Proceedings of the National Academy of Sciences of the United States of America

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104

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16

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6655-60

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Dynamic association and localization of human H/ACA RNP proteins

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20 March 2017

Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells

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20 March 2017

Crystal structure determination and site-directed mutagenesis of the Pyrococcus abyssi aCBF5-aNOP10 complex reveal crucial roles of the C-terminal domains of both proteins in H/ACA sRNP activity

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit

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20 March 2017

Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Mutations linked to dyskeratosis congenita cause changes in the structural equilibrium in telomerase RNA.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

A novel family of RNA tetraloop structure forms the recognition site for Saccharomyces cerevisiae RNase III.

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20 March 2017

The kink-turn: a new RNA secondary structure motif

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

5'ETS rRNA processing facilitated by four small RNAs: U14, E3, U17, and U3.

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20 March 2017

The Xplor-NIH NMR molecular structure determination package

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20 March 2017

MOLMOL: a program for display and analysis of macromolecular structures

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20 March 2017

Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

GAR1 is an essential small nucleolar RNP protein required for pre-rRNA processing in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Structures of helical junctions in nucleic acids

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Pseudouridine in RNA: what, where, how, and why

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

rRNA modifications and ribosome function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

20 March 2017

A general purpose RNA-cleaving DNA enzyme

1 reference

https://api.crossref.org/works/10.1073/PNAS.0701534104

22 April 2017

A box H/ACA small nucleolar RNA-like domain at the human telomerase RNA 3' end

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

7 April 2017

Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

7 April 2017

Function and synthesis of small nucleolar RNAs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

7 April 2017

Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

Structure of the human telomerase RNA pseudoknot reveals conserved tertiary interactions essential for function

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

Cbf5p, the putative pseudouridine synthase of H/ACA-type snoRNPs, can form a complex with Gar1p and Nop10p in absence of Nhp2p and box H/ACA snoRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

Crystal structure of the apo forms of psi 55 tRNA pseudouridine synthase from Mycobacterium tuberculosis: a hinge at the base of the catalytic cleft

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

Pseudouridines and pseudouridine synthases of the ribosome.

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29 September 2017

Resonance assignment and structure determination for RNA.

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29 September 2017

Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

Effects of polyvalent cations on the folding of an rRNA three-way junction and binding of ribosomal protein S15

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

A small nucleolar RNP protein is required for pseudouridylation of eukaryotic ribosomal RNAs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

29 September 2017

Assignment methodology for larger RNA oligonucleotides: application to an ATP-binding RNA aptamer

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29 September 2017

Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA

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29 September 2017

The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

2 June 2018

The complete set of H/ACA snoRNAs that guide rRNA pseudouridylations in Saccharomyces cerevisiae

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

2 June 2018

Preparation of isotopically enriched RNAs for heteronuclear NMR.

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2 June 2018

Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1871841

2 June 2018

Clustering of pseudouridine residues around the peptidyltransferase center of yeast cytoplasmic and mitochondrial ribosomes.

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https://api.crossref.org/works/10.1073%2FPNAS.0701534104

21 January 2018

Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita.

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https://api.crossref.org/works/10.1073%2FPNAS.0701534104

21 January 2018

Crystal structure of an H/ACA box ribonucleoprotein particle.

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https://api.crossref.org/works/10.1073%2FPNAS.0701534104

21 January 2018

Topology of three-way junctions in folded RNAs

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21 January 2018

New applications of 2D filtered/edited NOESY for assignment and structure elucidation of RNA and RNA-protein complexes

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21 January 2018

Posttranscriptionally modified nucleosides in transfer RNA: their locations and frequencies

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12 December 2020

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10.1073/PNAS.0701534104

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2007PNAS..104.6655W

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