The prokaryotic Cys2His2 zinc-finger adopts a novel fold as revealed by the NMR structure of Agrobacterium tumefaciens Ros DNA-binding domain (Q27648878)

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English	The prokaryotic Cys2His2 zinc-finger adopts a novel fold as revealed by the NMR structure of Agrobacterium tumefaciens Ros DNA-binding domain	scientific article

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scholarly article

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The prokaryotic Cys2His2 zinc-finger adopts a novel fold as revealed by the NMR structure of Agrobacterium tumefaciens Ros DNA-binding domain (English)

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Agrobacterium tumefaciens

object named as

Agrobacterium tumefaciens

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based on heuristic

inferred from title

8

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Benedetto Di Blasio

7

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Sabrina Esposito

3

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5

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Roberto Fattorusso

10

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Gaetano Malgieri

1

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object named as

Ilaria Baglivo

4

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object named as

Emilia M Pedone

6

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author name string

Luigi Russo

2

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Paolo V Pedone

9

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language of work or name

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publication date

30 October 2007

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Proceedings of the National Academy of Sciences of the United States of America

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104

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44

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17341-6

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NMR structure of the single QALGGH zinc finger domain from the Arabidopsis thaliana SUPERMAN protein

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20 March 2017

A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

20 March 2017

The solution structure of a specific GAGA factor-DNA complex reveals a modular binding mode

1 reference

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20 March 2017

The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc-finger/DNA recognition

1 reference

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20 March 2017

The program XEASY for computer-supported NMR spectral analysis of biological macromolecules

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20 March 2017

Automated NMR structure calculation with CYANA

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

20 March 2017

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA

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20 March 2017

Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra

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20 March 2017

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

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20 March 2017

AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR

1 reference

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20 March 2017

MOLMOL: a program for display and analysis of macromolecular structures

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

20 March 2017

Protein structure comparison by alignment of distance matrices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

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Sticky fingers: zinc-fingers as protein-recognition motifs

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20 March 2017

Zinc finger proteins: getting a grip on RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

20 March 2017

A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

20 March 2017

DNA recognition by Cys2His2 zinc finger proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

7 April 2017

Calculation of hydrodynamic properties of globular proteins from their atomic-level structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

7 April 2017

Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

7 April 2017

The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

29 September 2017

Potential bias in NMR relaxation data introduced by peak intensity analysis and curve fitting methods.

1 reference

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29 September 2017

The CATH Database provides insights into protein structure/function relationships.

1 reference

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29 September 2017

Agrobacterium transcriptional regulator Ros is a prokaryotic zinc finger protein that regulates the plant oncogene ipt

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

29 September 2017

The single Cys2-His2 zinc finger domain of the GAGA protein flanked by basic residues is sufficient for high-affinity specific DNA binding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

29 September 2017

Analysis of the Ros repressor of Agrobacterium virC and virD operons: molecular intercommunication between plasmid and chromosomal genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2077258

29 September 2017

Protein motifs 5. Zinc fingers

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29 September 2017

The virC and virD operons of the Agrobacterium Ti plasmid are regulated by the ros chromosomal gene: analysis of the cloned ros gene

1 reference

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29 September 2017

Lessons from zinc-binding peptides

1 reference

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2 June 2018

Negative transcriptional regulation of virulence and oncogenes of the Ti plasmid by Ros bearing a conserved C2H2-zinc finger motif

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0706659104

21 January 2018

Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0706659104

21 January 2018

Correlating backbone amide and side chain resonances in larger proteins by multiple relayed triple resonance NMR

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0706659104

21 January 2018

Spin Diffusion Measurements: Spin Echoes in the Presence of a Time-Dependent Field Gradient

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0706659104

21 January 2018

Long-range motional restrictions in a multidomain zinc-finger protein from anisotropic tumbling.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0706659104

21 January 2018

Rotational diffusion anisotropy of proteins from simultaneous analysis of 15N and 13C alpha nuclear spin relaxation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17956987

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Novel Type of Zinc Finger DNA Binding Domain in theAgrobacteriumtumefaciensTranscriptional Regulator Ros†

1 reference

https://pubmed.ncbi.nlm.nih.gov/17956987

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0706659104

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2007PNAS..10417341M

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PMC publication ID

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PubMed publication ID

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ResearchGate publication ID

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