Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin. (Q27653700)

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21 January 2020

title

Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin (English)

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21 January 2020

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7

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21 January 2020

Shinya Koshihara

11

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21 January 2020

Shin-ichi Adachi

12

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21 January 2020

author name string

Ayana Tomita

1

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21 January 2020

Tokushi Sato

2

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21 January 2020

Kouhei Ichiyanagi

3

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21 January 2020

Shunsuke Nozawa

4

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21 January 2020

Hirohiko Ichikawa

5

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21 January 2020

Matthieu Chollet

6

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21 January 2020

Sam-Yong Park

8

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21 January 2020

Takayuki Tsuduki

9

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21 January 2020

Takahisa Yamato

10

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21 January 2020

language of work or name

English

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publication date

9 February 2009

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Proceedings of the National Academy of Sciences of the United States of America

21 January 2020

published in

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21 January 2020

volume

106

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21 January 2020

issue

8

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21 January 2020

page(s)

2612-2616

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Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography

21 January 2020

cites work

1 reference

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Direct observation of photolysis-induced tertiary structural changes in hemoglobin

20 March 2017

1 reference

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Ligand binding and conformational motions in myoglobin

20 March 2017

1 reference

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Structure of a ligand-binding intermediate in wild-type carbonmonoxy myoglobin

20 March 2017

1 reference

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Crystal structure of photolysed carbonmonoxy-myoglobin

20 March 2017

1 reference

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Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K

20 March 2017

1 reference

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CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues

20 March 2017

1 reference

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The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

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Developing 100 ps-resolved X-ray structural analysis capabilities on beamline NW14A at the Photon Factory Advanced Ring.

20 March 2017

1 reference

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Imaging the migration pathways for O2, CO, NO, and Xe inside myoglobin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.

29 September 2017

1 reference

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Picosecond time-resolved X-ray crystallography: probing protein function in real time

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Extended molecular dynamics simulation of the carbon monoxide migration in sperm whale myoglobin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Slaving: solvent fluctuations dominate protein dynamics and functions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Initial trajectory of carbon monoxide after photodissociation from myoglobin at cryogenic temperatures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Kinetic pathways and barriers for ligand binding to myoglobin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

X-ray structure determination of a metastable state of carbonmonoxy myoglobin after photodissociation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Infrared spectroscopy of photodissociated carboxymyoglobin at low temperatures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637904

Cavities in proteins: structure of a metmyoglobin-xenon complex solved to 1.9 A.

29 September 2017

1 reference

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Molecular dynamics simulations of cooling in laser-excited heme proteins

29 September 2017

1 reference

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Ligand migration in sperm whale myoglobin.

29 September 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0807774106

Watching a protein as it functions with 150-ps time-resolved x-ray crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0807774106

A comparison between molecular dynamics and X-ray results for dissociated CO in myoglobin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0807774106

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0807774106

Dynamics of ligand binding to myoglobin

21 January 2018

1 reference

12 December 2020

Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin

1 reference

12 December 2020

Dynamics of ligand binding to heme proteins

1 reference

12 December 2020

Geminate recombination of carbon monoxide to myoglobin

1 reference

12 December 2020

Conformational deformation in deoxymyoglobin by hydrostatic pressure

1 reference

12 December 2020

Strain tensor field in proteins

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0807774106

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204297%20AND%20SRC:MED&resulttype=core&format=json

OpenCitations bibliographic resource ID

21 January 2020

ADS bibcode

2009PNAS..106.2612T

0 references

3677173

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3677173

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204297%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

PubMed publication ID

19204297

1 reference