Promiscuous Substrate Recognition in Folding and Assembly Activities of the Trigger Factor Chaperone (Q27657360)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19737520%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone (English)

1 reference

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7 February 2020

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Erik Martinez-Hackert

series ordinal

1

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7 February 2020

author name string

Wayne A Hendrickson

series ordinal

2

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7 February 2020

language of work or name

English

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publication date

1 September 2009

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7 February 2020

1 reference

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7 February 2020

volume

138

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7 February 2020

issue

5

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7 February 2020

page(s)

923-934

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Molecular mechanism and structure of Trigger Factor bound to the translating ribosome

7 February 2020

cites work

1 reference

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Structures of and interactions between domains of trigger factor from Thermotoga maritima

20 March 2017

1 reference

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Structure of the molecular chaperone prefoldin: unique interaction of multiple coiled coil tentacles with unfolded proteins

20 March 2017

1 reference

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The atomic structure of protein-protein recognition sites

20 March 2017

1 reference

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Shape complementarity at protein/protein interfaces

20 March 2017

1 reference

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Molecular chaperones in the cytosol: from nascent chain to folded protein

20 March 2017

1 reference

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Principles that govern the folding of protein chains

20 March 2017

1 reference

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Interaction network containing conserved and essential protein complexes in Escherichia coli

20 March 2017

1 reference

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Identification of nascent chain interaction sites on trigger factor

7 April 2017

1 reference

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Molecular chaperones: assisting assembly in addition to folding

29 September 2017

1 reference

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An assembly landscape for the 30S ribosomal subunit

29 September 2017

1 reference

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Functional dissection of Escherichia coli trigger factor: unraveling the function of individual domains

29 September 2017

1 reference

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In vivo analysis of the overlapping functions of DnaK and trigger factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Chaperonin-mediated protein folding: fate of substrate polypeptide

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: molecular simulations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger Factor and DnaK possess overlapping substrate pools and binding specificities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Binding specificity of Escherichia coli trigger factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Assisted folding of D-glyceraldehyde-3-phosphate dehydrogenase by trigger factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor is induced upon cold shock and enhances viability of Escherichia coli at low temperatures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Escherichia coli trigger factor is a prolyl isomerase that associates with nascent polypeptide chains.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Early events in preprotein recognition in E. coli: interaction of SRP and trigger factor with nascent polypeptides.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

A ribosome-associated peptidyl-prolyl cis/trans isomerase identified as the trigger factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor: a soluble protein that folds pro-OmpA into a membrane-assembly-competent form

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Nucleosomes are assembled by an acidic protein which binds histones and transfers them to DNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Chaperonin complex with a newly folded protein encapsulated in the folding chamber

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Existence of abnormal protein aggregates in healthy Escherichia coli cells

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Tagging ribosomal protein S7 allows rapid identification of mutants defective in assembly and function of 30 S subunits

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Cooperation of enzymatic and chaperone functions of trigger factor in the catalysis of protein folding

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

ProOmpA is stabilized for membrane translocation by either purified E. coli trigger factor or canine signal recognition particle

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Real-time observation of trigger factor function on translating ribosomes.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

The C-terminal domain of Escherichia coli trigger factor represents the central module of its chaperone activity.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor binding to ribosomes with nascent peptide chains of varying lengths and sequences.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Structural features of the GroEL-GroES nano-cage required for rapid folding of encapsulated protein.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Proteomic Profiling of ClpXP Substrates after DNA Damage Reveals Extensive Instability within SOS Regulon

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor forms a protective shield for nascent polypeptides at the ribosome.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

PIBASE: a comprehensive database of structurally defined protein interfaces

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Dimeric trigger factor stably binds folding-competent intermediates and cooperates with the DnaK-DnaJ-GrpE chaperone system to allow refolding

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor in complex with the ribosome forms a molecular cradle for nascent proteins.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Function of trigger factor and DnaK in multidomain protein folding: increase in yield at the expense of folding speed

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor peptidyl-prolyl cis/trans isomerase activity is not essential for the folding of cytosolic proteins in Escherichia coli

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor-assisted folding of bovine carbonic anhydrase II.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Authentic precursors to ribosomal subunits accumulate in Escherichia coli in the absence of functional DnaK chaperone.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Interaction of trigger factor with the ribosome

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Three-state equilibrium of Escherichia coli trigger factor

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

L23 protein functions as a chaperone docking site on the ribosome

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor retards protein export in Escherichia coli.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Crystal structure of the 30 s ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 s RNA

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Dynamic association of trigger factor with protein substrates

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

The chaperone activity of trigger factor is distinct from its isomerase activity during co-expression with adenylate kinase in Escherichia coli

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Trigger factor and DnaK cooperate in folding of newly synthesized proteins.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Molecular chaperones. Opening and closing the Anfinsen cage.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

The "trigger factor cycle" includes ribosomes, presecretory proteins, and the plasma membrane

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799252

Polypeptide flux through bacterial Hsp70: DnaK cooperates with trigger factor in chaperoning nascent chains

27 November 2018

1 reference

12 December 2020

Exploring the capacity of trigger factor to function as a shield for ribosome bound polypeptide chains

1 reference

12 December 2020

Dynamics of trigger factor interaction with translating ribosomes

1 reference

12 December 2020

Genetic dissection of the roles of chaperones and proteases in protein folding and degradation in the Escherichia coli cytosol

1 reference

12 December 2020

Identification of ribosomal protein S7 as a repressor of translation within the str operon of E. coli

1 reference

12 December 2020

10.1016/J.CELL.2009.07.044

Identifiers

DOI

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19737520%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19737520%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

PubMed publication ID

19737520

2 references