Cloning, functional expression, biochemical characterization, and structural analysis of a haloalkane dehalogenase from Plesiocystis pacifica SIR-1 (Q27667928)

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English	Cloning, functional expression, biochemical characterization, and structural analysis of a haloalkane dehalogenase from Plesiocystis pacifica SIR-1	scientific article

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scholarly article

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Cloning, functional expression, biochemical characterization, and structural analysis of a haloalkane dehalogenase from Plesiocystis pacifica SIR-1 (English)

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Winfried Hinrichs

6

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Uwe T. Bornscheuer

object named as

Uwe T Bornscheuer

7

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author name string

Martin Hesseler

1

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Xenia Bogdanović

2

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Aurelio Hidalgo

3

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Jose Berenguer

4

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Gottfried J Palm

5

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publication date

August 2011

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Applied Microbiology and Biotechnology

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91

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4

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1049-60

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Development of an enzymatic fiber-optic biosensor for detection of halogenated hydrocarbons

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Crystallization and preliminary X-ray diffraction studies of the putative haloalkane dehalogenase DppA from Plesiocystis pacifica SIR-I

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Alpha/beta hydrolase fold: an update

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Modification of activity and specificity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26 by engineering of its entrance tunnel.

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Phylogenetic analysis of haloalkane dehalogenases

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The CCP4 suite: programs for protein crystallography

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Multiple sequence alignment with hierarchical clustering

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CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues

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Coot: model-building tools for molecular graphics

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ESPript: analysis of multiple sequence alignments in PostScript

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Dali server: conservation mapping in 3D

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Alpha/Beta-hydrolase fold enzymes: structures, functions and mechanisms

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Evolving haloalkane dehalogenases

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Biocatalysis by dehalogenating enzymes

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Cloning, biochemical properties, and distribution of mycobacterial haloalkane dehalogenases

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Biochemical characterization of haloalkane dehalogenases DrbA and DmbC, Representatives of a Novel Subfamily.

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Repositioning the catalytic triad aspartic acid of haloalkane dehalogenase: effects on stability, kinetics, and structure.

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Plesiocystis pacifica gen. nov., sp. nov., a marine myxobacterium that contains dihydrogenated menaquinone, isolated from the Pacific coasts of Japan

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Biochemical characterization of broad-specificity enzymes using multivariate experimental design and a colorimetric microplate assay: characterization of the haloalkane dehalogenase mutants.

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X-ray crystal structure of Mycobacterium tuberculosis haloalkane dehalogenase Rv2579

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Phasercrystallographic software

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ARP/wARP and automatic interpretation of protein electron density maps

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Haloalkane dehalogenases: structure of a Rhodococcus enzyme

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Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 A resolution: dynamics of catalytic residues

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The alpha/beta hydrolase fold

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Functionally relevant motions of haloalkane dehalogenases occur in the specificity-modulating cap domains

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CAVER: a new tool to explore routes from protein clefts, pockets and cavities

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The finer things in X-ray diffraction data collection

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Generating segmental mutations in haloalkane dehalogenase: a novel part in the directed evolution toolbox

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Enzymes fight chemical weapons

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Enantioselectivity of haloalkane dehalogenases and its modulation by surface loop engineering

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Dehalogenases applied to industrial-scale biocatalysis

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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REFMAC5 dictionary: organization of prior chemical knowledge and guidelines for its use

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Refined X-ray structures of haloalkane dehalogenase at pH 6.2 and pH 8.2 and implications for the reaction mechanism

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Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site

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Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase

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21 January 2018

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10.1007/S00253-011-3328-X

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