Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing (Q27668022)

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2 February 2020

title

Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing (English)

1 reference

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alternative mRNA splicing, via spliceosome

2 February 2020

main subject

1 reference

1

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2 February 2020

Manuel Ares

6

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2 February 2020

author name string

Tim Ammon

2

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2 February 2020

Grzegorz M Popowicz

3

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2 February 2020

Marcin Krajewski

4

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2 February 2020

Roland J Nagel

5

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2 February 2020

Tad A Holak

7

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2 February 2020

Stefan Jentsch

8

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2 February 2020

language of work or name

English

0 references

publication date

25 May 2011

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2 February 2020

number of pages

6

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based on heuristic

inferred from page(s)

published in

Nature

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2 February 2020

volume

474

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2 February 2020

issue

7350

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2 February 2020

page(s)

173-178

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Origin and function of ubiquitin-like proteins

2 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Solution structure of the yeast ubiquitin-like modifier protein Hub1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Structural analysis of UBL5, a novel ubiquitin-like modifier

20 March 2017

1 reference

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The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes

20 March 2017

1 reference

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Isolation of a ubiquitin-like (UBL5) gene from a screen identifying highly expressed and conserved iris genes

20 March 2017

1 reference

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Structure determination of the small ubiquitin-related modifier SUMO-1

20 March 2017

1 reference

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Synthetic, structural and biological studies of the ubiquitin system: the total chemical synthesis of ubiquitin

20 March 2017

1 reference

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Automated refinement of protein models

20 March 2017

1 reference

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The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

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XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density

20 March 2017

1 reference

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A single SR-like protein, Npl3, promotes pre-mRNA splicing in budding yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

The inner nuclear membrane protein Src1 associates with subtelomeric genes and alters their regulated gene expression

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Assigning function to yeast proteins by integration of technologies.

20 March 2017

1 reference

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Role of a ubiquitin-like modification in polarized morphogenesis.

20 March 2017

1 reference

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Composition and functional characterization of the yeast spliceosomal penta-snRNP.

20 March 2017

1 reference

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SRC1: an intron-containing yeast gene involved in sister chromatid segregation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines

20 March 2017

1 reference

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A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

The spliceosome: design principles of a dynamic RNP machine

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches

20 March 2017

1 reference

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Ubiquitin-binding domains - from structures to functions

7 April 2017

1 reference

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Improved sensitivity of HSQC spectra of exchanging protons at short interscan delays using a new fast HSQC (FHSQC) detection scheme that avoids water saturation

7 April 2017

1 reference

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Single Transition-to-single Transition Polarization Transfer (ST2-PT) in [15N,1H]-TROSY.

7 April 2017

1 reference

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Gradient and sensitivity enhancement of 2D TROSY with water flip-back, 3D NOESY-TROSY and TOCSY-TROSY experiments

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Alternative splicing and evolution: diversification, exon definition and function

29 September 2017

1 reference

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The evolutionarily conserved core design of the catalytic activation step of the yeast spliceosome

29 September 2017

1 reference

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Ubiquitin-like protein 5 positively regulates chaperone gene expression in the mitochondrial unfolded protein response

29 September 2017

1 reference

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The ABC's (and XYZ's) of peptide sequencing

29 September 2017

1 reference

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The ubiquitin-like protein HUB1 forms SDS-resistant complexes with cellular proteins in the absence of ATP.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

Pre-mRNA splicing in Schizosaccharomyces pombe: regulatory role of a kinase conserved from fission yeast to mammals

29 September 2017

1 reference

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Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

29 September 2017

1 reference

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Test of intron predictions reveals novel splice sites, alternatively spliced mRNAs and new introns in meiotically regulated genes of yeast

29 September 2017

1 reference

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Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1

29 September 2017

1 reference

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SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587138

29 September 2017

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

Hub1 is an essential ubiquitin-like protein without functioning as a typical modifier in fission yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

Small ubiquitin-like modifier (SUMO) recognition of a SUMO binding motif: a reversal of the bound orientation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

Exploring functional relationships between components of the gene expression machinery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

mRNAs encoding zinc finger protein isoforms are expressed by alternative splicing of an in-frame intron in fission yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

A quantitative analysis of the effects of 5′ junction and TACTAAC box mutants and mutant combinations on yeast mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE10143

21 January 2018

Identifiers

DOI

10.1038/NATURE10143

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21614000%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

2 February 2020

1021911598

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21614000%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21614000%20AND%20SRC:MED&resulttype=core&format=json