The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH (Q27675391)

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English	The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH	scientific article

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scholarly article

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The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH (English)

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crystal structure

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Vibrio cholerae

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Karen Skorupski

6

object named as

Karen Skorupski

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author name string

Jennifer L Taylor

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Rukman S De Silva

2

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Gabriela Kovacikova

3

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Wei Lin

4

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Ronald K Taylor

5

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F Jon Kull

7

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language of work or name

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publication date

February 2012

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Molecular Microbiology

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83

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3

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457-70

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262181

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1 reference

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1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2011.07919.X

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1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2011.07919.X

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1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2011.07919.X

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1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2011.07919.X

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1 reference

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1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2011.07919.X

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1 reference

https://pubmed.ncbi.nlm.nih.gov/22053934

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1111/J.1365-2958.2011.07919.X

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