Crystal and solution structures of the oligonucleotide d(ATGCGCAT)2: a combined X-ray and NMR study (Q27676161)

1

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D G Brown

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M R Sanderson

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T Chwalinski

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S Neidle

5

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J M Veal

6

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R L Jones

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W D Wilson

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G Zon

Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA

9

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language of work or name

English

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publication date

25 September 1990

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published in

Nucleic Acids Research

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volume

18

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issue

18

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page(s)

5521-8

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cites work

1 reference

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The crystal structure of d(GGATGGGAG): an essential part of the binding site for transcription factor IIIA

20 March 2017

1 reference

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Crystal structure analysis of an A-DNA fragment at 1.8 A resolution: d(GCCCGGGC)

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

Crystal structure of trp repressor/operator complex at atomic resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

Structure of an alternating-B DNA helix and its relationship to A-tract DNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

Structures of the mismatched duplex d(GGGTGCCC) and one of its Watson-Crick analogues d(GGGCGCCC)

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

The crystal structure of d(CCCCGGGG): a new A-form variant with an extended backbone conformation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

Recognition of a DNA operator by the repressor of phage 434: a view at high resolution

20 March 2017

1 reference

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Structural variation in d(CTCTAGAG). Implications for protein-DNA interactions

20 March 2017

1 reference

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Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC)

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

The conformation of the DNA double helix in the crystal is dependent on its environment

20 March 2017

1 reference

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The crystal structure of d(GTACGTAC) at 2.25 A resolution: are the A-DNA's always unwound approximately 10 degrees at the C-G steps?

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

The effect of the base sequence on the fine structure of the DNA double helix

20 March 2017

1 reference

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The TFIIIA recognition fragment d(GGATGGGAG).d(CTCCCATCC) is B-form in solution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

2D NMR investigation of the binding of the anticancer drug actinomycin D to duplexed dATGCGCAT: conformational features of the unique 2:1 adduct

29 September 2017

1 reference

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Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: a graphical method

29 September 2017

1 reference

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Conformational analysis of d(C3G3), a B-family duplex in solution

2 June 2018

1 reference

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Deoxyribose conformation in [d(GTATATAC)]2: evaluation of sugar pucker by simulation of double-quantum-filtered COSY cross-peaks

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332232

Conformational analysis of the sugar ring in nucleosides and nucleotides. New description using the concept of pseudorotation

2 June 2018

1 reference

12 December 2020

Assignment of the non-exchangeable proton resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) using two-dimensional nuclear magnetic resonance methods

1 reference

12 December 2020

Crystallographic refinement of yeast aspartic acid transfer RNA

1 reference

12 December 2020

An underlying repeat in some transcriptional control sequences corresponding to half a double helical turn of DNA

1 reference

12 December 2020

NMR studies of echinomycin bisintercalation complexes with d(A1-C2-G3-T4) and d(T1-C2-G3-A4) duplexes in aqueous solution: sequence-dependent formation of Hoogsteen A1.T4 and Watson--Crick T1.A4 base pairs flanking the bisintercalation site

1 reference

12 December 2020

Conformational studies of d-(AAAAATTTTT)2 using constraints from nuclear overhauser effects and from quantitative analysis of the cross-peak fine structures in two-dimensional 1H nuclear magnetic resonance spectra

1 reference

12 December 2020

Solid-phase synthesis and high-resolution NMR studies of two synthetic double-helical RNA dodecamers: r(CGCGAAUUCGCG) and r(CGCGUAUACGCG)

1 reference

12 December 2020

Effect of crystal packing environment on conformation of the DNA duplex. Molecular structure of the A-DNA octamer d(G-T-G-T-A-C-A-C) in two crystal forms

1 reference

12 December 2020

Structure of a B-DNA dodecamer. III. Geometry of hydration

1 reference

12 December 2020