Structural Basis for the Rescue of Stalled Ribosomes: Structure of YaeJ Bound to the Ribosome (Q27678063)

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26 January 2020

title

Structural basis for the rescue of stalled ribosomes: structure of YaeJ bound to the ribosome (English)

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26 January 2020

1

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26 January 2020

David P Bulkley

series ordinal

3

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26 January 2020

author name string

Sai V Seetharaman

series ordinal

2

1 reference

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26 January 2020

Thomas A Steitz

series ordinal

4

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26 January 2020

language of work or name

English

0 references

publication date

1 March 2012

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26 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22422986%20AND%20SRC:MED&resulttype=core&format=json

26 January 2020

volume

335

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26 January 2020

issue

6074

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26 January 2020

page(s)

1370-1372

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The structure of the eukaryotic ribosome at 3.0 Å resolution

26 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Insights into Translational Termination from the Structure of RF2 Bound to the Ribosome

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Structural basis for translation termination on the 70S ribosome

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Structure of the 70S ribosome complexed with mRNA and tRNA

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Calculation of protein extinction coefficients from amino acid sequence data

20 March 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1217443

Formation of the First Peptide Bond: The Structure of EF-P Bound to the 70S Ribosome

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1217443

Coot: model-building tools for molecular graphics

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1217443

Protein structure prediction servers at University College London

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1217443

Clustal W and Clustal X version 2.0

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1217443

ESPript: analysis of multiple sequence alignments in PostScript

22 April 2017

1 reference

https://api.crossref.org/works/10.1126/SCIENCE.1217443

PHENIX: building new software for automated crystallographic structure determination

22 April 2017

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

SmpB as the handyman of tmRNA during trans-translation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

tmRNA regulates synthesis of the ArfA ribosome rescue factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

YaeJ is a novel ribosome-associated protein in Escherichia coli that can hydrolyze peptidyl-tRNA on stalled ribosomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Mutations at the accommodation gate of the ribosome impair RF2-dependent translation termination

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Role of the C-terminal tail of SmpB in the early stage of trans-translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Peptide release on the ribosome: mechanism and implications for translational control

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

An induced-fit mechanism to promote peptide bond formation and exclude hydrolysis of peptidyl-tRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Ribosome rescue by tmRNA requires truncated mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Analysis of the role of trans-translation in the requirement of tmRNA for lambdaimmP22 growth in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Accommodation of tmRNA-SmpB into stalled ribosomes: a cryo-EM study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

SsrA-mediated trans-translation plays a role in mRNA quality control by facilitating degradation of truncated mRNAs

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3377438

Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways.

2 June 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

Ribosome rescue by Escherichia coli ArfA (YhdL) in the absence of trans-translation system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

A tripeptide 'anticodon' deciphers stop codons in messenger RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

Interaction of SmpB with ribosome from directed hydroxyl radical probing

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

Distinct functions of elongation factor G in ribosome recycling and translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

In vivo deuteration of transfer RNAs: overexpression and large-scale purification of deuterated specific tRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1217443

The essential role of the invariant GGQ motif in the function and stability in vivo of bacterial release factors RF1 and RF2

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22422986

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1217443

2 references

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26 January 2020

ADS bibcode

2012Sci...335.1370G

0 references

1 reference

2 references

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26 January 2020

PubMed publication ID

22422986

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22422986%20AND%20SRC:MED&resulttype=core&format=json