Biochemical and Structural Characterization of the Arabidopsis Bifunctional Enzyme Dethiobiotin Synthetase–Diaminopelargonic Acid Aminotransferase: Evidence for Substrate Channeling in Biotin Synthesis (Q27678833)

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English	Biochemical and Structural Characterization of the Arabidopsis Bifunctional Enzyme Dethiobiotin Synthetase–Diaminopelargonic Acid Aminotransferase: Evidence for Substrate Channeling in Biotin Synthesis	scientific article

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scholarly article

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Biochemical and Structural Characterization of the Arabidopsis Bifunctional Enzyme Dethiobiotin Synthetase–Diaminopelargonic Acid Aminotransferase: Evidence for Substrate Channeling in Biotin Synthesis (English)

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Jean-Luc Ferrer

5

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author name string

David Cobessi

1

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Renaud Dumas

2

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Virginie Pautre

3

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Céline Meinguet

4

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Claude Alban

6

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publication date

April 2012

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24

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4

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1608-25

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Biotin synthesis begins by hijacking the fatty acid synthetic pathway

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Structural Characterization of the Mycobacterium tuberculosis Biotin Biosynthesis Enzymes 7,8-Diaminopelargonic Acid Synthase and Dethiobiotin Synthetase,

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20 March 2017

Biotin synthesis in plants. The first committed step of the pathway is catalyzed by a cytosolic 7-keto-8-aminopelargonic acid synthase

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Conserved and nonconserved residues in the substrate binding site of 7,8-diaminopelargonic acid synthase from Escherichia coli are essential for catalysis

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20 March 2017

Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme

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20 March 2017

Crystal structure of a bifunctional aldolase-dehydrogenase: sequestering a reactive and volatile intermediate

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20 March 2017

The dual-specific active site of 7,8-diaminopelargonic acid synthase and the effect of the R391A mutation

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20 March 2017

Crystal structure of diaminopelargonic acid synthase: evolutionary relationships between pyridoxal-5'-phosphate-dependent enzymes

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20 March 2017

Mechanism of an ATP-dependent carboxylase, dethiobiotin synthetase, based on crystallographic studies of complexes with substrates and a reaction intermediate

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20 March 2017

Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold

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20 March 2017

Phasercrystallographic software

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20 March 2017

Inference of macromolecular assemblies from crystalline state

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20 March 2017

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

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20 March 2017

Coot: model-building tools for molecular graphics

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20 March 2017

PHENIX: building new software for automated crystallographic structure determination

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20 March 2017

Errors in protein structures

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20 March 2017

Biochemical characterization of the Arabidopsis biotin synthase reaction. The importance of mitochondria in biotin synthesis

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20 March 2017

Inhibition of 7,8-diaminopelargonic acid aminotransferase from Mycobacterium tuberculosis by chiral and achiral anologs of its substrate: biological implications

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20 March 2017

7,8-Diaminoperlargonic acid aminotransferase from Mycobacterium tuberculosis, a potential therapeutic target. Characterization and inhibition studies

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20 March 2017

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

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7 April 2017

Biotin sensing: universal influence of biotin status on transcription

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29 September 2017

The role of plant mitochondria in the biosynthesis of coenzymes.

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29 September 2017

Non-coding RNAs: lost in translation?

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29 September 2017

SUBA: the Arabidopsis Subcellular Database.

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29 September 2017

Compartmentation in plant metabolism

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29 September 2017

Uptake, localization, and noncarboxylase roles of biotin

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

29 September 2017

BIOTIN METABOLISM IN PLANTS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

29 September 2017

Biotin in microbes, the genes involved in its biosynthesis, its biochemical role and perspectives for biotechnological production.

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29 September 2017

Conservation of the biotin regulon and the BirA regulatory signal in Eubacteria and Archaea.

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29 September 2017

Structural enzymology of biotin biosynthesis

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29 September 2017

Investigation of the mechanism of phosphoribosylamine transfer from glutamine phosphoribosylpyrophosphate amidotransferase to glycinamide ribonucleotide synthetase

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

29 September 2017

The purification and properties of dethiobiotin synthetase

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

29 September 2017

The mechanism of biotin-dependent enzymes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

29 September 2017

Substrate channeling of NADH in mitochondrial redox processes

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29 September 2017

Crystal structure of two quaternary complexes of dethiobiotin synthetase, enzyme-MgADP-AlF3-diaminopelargonic acid and enzyme-MgADP-dethiobiotin-phosphate; implications for catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

2 June 2018

Active site mutants of Escherichia coli dethiobiotin synthetase: effects of mutations on enzyme catalytic and structural properties.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

2 June 2018

Folate biosynthesis in higher plants: purification and molecular cloning of a bifunctional 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase/7,8-dihydropteroate synthase localized in mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

2 June 2018

Measurement of protein by spectrophotometry at 205 nm.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

2 June 2018

Transient-time analysis of substrate-channelling in interacting enzyme systems

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

2 June 2018

An embryo-lethal mutant of Arabidopsis thaliana is a biotin auxotroph

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

2 June 2018

Biotin Synthase Exhibits Burst Kinetics and Multiple Turnovers in the Absence of Inhibition by Products and Product-Related Biomolecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

27 November 2018

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27 November 2018

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27 November 2018

The reacquisition of biotin prototrophy in Saccharomyces cerevisiae involved horizontal gene transfer, gene duplication and gene clustering

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

27 November 2018

A bifunctional locus (BIO3-BIO1) required for biotin biosynthesis in Arabidopsis

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27 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398567

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The plant biotin synthase reaction. Identification and characterization of essential mitochondrial accessory protein components

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27 November 2018

An embryo-defective mutant of arabidopsis disrupted in the final step of biotin synthesis

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27 November 2018

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27 November 2018

Biotin biosynthesis in higher plant cells. Identification of intermediates.

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27 November 2018

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27 November 2018

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27 November 2018

The Arabidopsis Bio2 protein requires mitochondrial targeting for activity

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12 December 2020

based on heuristic

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Arrested Embryos from the bio1 Auxotroph of Arabidopsis thaliana Contain Reduced Levels of Biotin

1 reference

https://pubmed.ncbi.nlm.nih.gov/22547782

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complementation of an Arabidopsis thaliana biotin auxotroph with an Escherichia coli biotin biosynthetic gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/22547782

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Substrate binding and carboxylation by dethiobiotin synthetase--a kinetic and X-ray study

1 reference

https://pubmed.ncbi.nlm.nih.gov/22547782

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biotin synthesis in higher plants: purification and characterization of bioB gene product equivalent from Arabidopsis thaliana overexpressed in Escherichia coli and its subcellular localization in pea leaf cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/22547782

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

FIP: a highly automated beamline for multiwavelength anomalous diffraction experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/22547782

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1105/TPC.112.097675

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