Functional modulation of a protein folding landscape via side-chain distortion (Q27679315)

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Probing the Function of Heme Distortion in the H-NOX Family

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

1.2A-resolution crystal structures reveal the second tetrahedral intermediates of streptogrisin B (SGPB)

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Distortion of flavin geometry is linked to ligand binding in cholesterol oxidase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Mesophile versus thermophile: insights into the structural mechanisms of kinetic stability

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Structural and mechanistic exploration of acid resistance: kinetic stability facilitates evolution of extremophilic behavior

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Pulse proteolysis: A simple method for quantitative determination of protein stability and ligand binding

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Conformational strain in the hydrophobic core and its implications for protein folding and design

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Crystallographic evidence for substrate ring distortion and protein conformational changes during catalysis in cellobiohydrolase Ce16A from trichoderma reesei

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Structure of alpha-lytic protease complexed with its pro region

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Enhanced protein thermostability from site-directed mutations that decrease the entropy of unfolding

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Refinement of macromolecular structures by the maximum-likelihood method

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

20 March 2017

https://api.crossref.org/works/10.1073/PNAS.1119274109

On the precision of experimentally determined protein folding rates and phi-values

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Mapping the transition state and pathway of protein folding by protein engineering

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Nonplanar peptide bonds in proteins are common and conserved but not biased toward active sites

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

The PDZ2 domain of syntenin at ultra-high resolution: bridging the gap between macromolecular and small molecule crystallography

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Disabling the folding catalyst is the last critical step in alpha-lytic protease folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

The folding landscape of Streptomyces griseus protease B reveals the energetic costs and benefits associated with evolving kinetic stability

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Kinetic stability as a mechanism for protease longevity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Kinetics versus thermodynamics in protein folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Crystal structure analysis of a serine proteinase from Streptomyces fradiae at 0.16-nm resolution and molecular modeling of an acidic-amino-acid-specific proteinase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

The detection of substrate distortion by lysozyme: an application of NMR to the study of enzyme substrate reactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

Protein structure refinement: Streptomyces griseus serine protease A at 1.8 Å resolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386061

The 0.83 A resolution crystal structure of alpha-lytic protease reveals the detailed structure of the active site and identifies a source of conformational strain

29 September 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Unfolded conformations of alpha-lytic protease are more stable than its native state

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Energetic landscape of alpha-lytic protease optimizes longevity through kinetic stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

The folding landscape of an alpha-lytic protease variant reveals the role of a conserved beta-hairpin in the development of kinetic stability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Comprehensive analysis of protein folding activation thermodynamics reveals a universal behavior violated by kinetically stable proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Probing the high energy states in proteins by proteolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Transition states and the meaning of Phi-values in protein folding kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Heme distortion modulated by ligand-protein interactions in inducible nitric-oxide synthase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Ultrahigh resolution structures of nitrophorin 4: heme distortion in ferrous CO and NO complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Functional Linkage Between the Active Site of α-Lytic Protease and Distant Regions of Structure: Scanning Alanine Mutagenesis of a Surface Loop Affects Activity and Substrate Specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1119274109

Denatured State Effects and the Origin of Nonclassical φ Values in Protein Folding

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22635267

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Direct observation of substrate distortion by triosephosphate isomerase using Fourier transform infrared spectroscopy

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22635267