Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases (Q27683907)

9

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Joanne Chory

7

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James A Wohlschlegel

8

object named as

James A Wohlschlegel

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author name string

Xuehua Zhong

1

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Jiamu Du

2

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Christopher J Hale

3

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Javier Gallego-Bartolome

4

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Suhua Feng

5

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Ajay A Vashisht

6

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Steven E Jacobsen

SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation

10

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language of work or name

English

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publication date

22 May 2014

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published in

Cell

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volume

157

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issue

5

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page(s)

1050-60

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cites work

1 reference

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Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1

20 March 2017

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Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants

20 March 2017

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Structure-Based Mechanistic Insights into DNMT1-Mediated Maintenance DNA Methylation

20 March 2017

1 reference

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Structure of DNMT1-DNA Complex Reveals a Role for Autoinhibition in Maintenance DNA Methylation

20 March 2017

1 reference

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Establishing, maintaining and modifying DNA methylation patterns in plants and animals

20 March 2017

1 reference

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

20 March 2017

1 reference

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Human DNA methylomes at base resolution show widespread epigenomic differences

20 March 2017

1 reference

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RNA polymerase V transcription guides ARGONAUTE4 to chromatin

20 March 2017

1 reference

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Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation

20 March 2017

1 reference

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Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine

20 March 2017

1 reference

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Features and development of Coot

20 March 2017

1 reference

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Highly integrated single-base resolution maps of the epigenome in Arabidopsis

20 March 2017

1 reference

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Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

7 April 2017

1 reference

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Many paths to methyltransfer: a chronicle of convergence

7 April 2017

1 reference

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Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis.

7 April 2017

1 reference

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Interplay between active chromatin marks and RNA-directed DNA methylation in Arabidopsis thaliana

29 September 2017

1 reference

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DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV

29 September 2017

1 reference

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The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin

29 September 2017

1 reference

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Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

29 September 2017

1 reference

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DDR complex facilitates global association of RNA polymerase V to promoters and evolutionarily young transposons

29 September 2017

1 reference

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The de novo cytosine methyltransferase DRM2 requires intact UBA domains and a catalytically mutated paralog DRM3 during RNA-directed DNA methylation in Arabidopsis thaliana.

29 September 2017

1 reference

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BSMAP: whole genome bisulfite sequence MAPping program

29 September 2017

1 reference

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Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Gateway-compatible vectors for plant functional genomics and proteomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Strand-biased DNA methylation associated with centromeric regions in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Plant DNA methyltransferases.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Conserved plant genes with similarity to mammalian de novo DNA methyltransferases.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Isolation and identification by sequence homology of a putative cytosine methyltransferase from Arabidopsis thaliana

29 September 2017

1 reference

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RNA polymerase V-dependent small RNAs in Arabidopsis originate from small, intergenic loci including most SINE repeats.

29 September 2017

1 reference

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Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Preferential de novo methylation of cytosine residues in non-CpG sequences by a domains rearranged DNA methyltransferase from tobacco plants

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4123750

Processing of X-ray diffraction data collected in oscillation mode

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24855943

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2014.03.056

1 reference

1 reference

1 reference

PubMed publication ID

24855943

1 reference