Protein solution structure calculations in solution: solvated molecular dynamics refinement of calbindin D9k (Q27748243)

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7 November 2019

title

Protein solution structure calculations in solution: solvated molecular dynamics refinement of calbindin D9k (English)

1 reference

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molecular dynamics simulation

7 November 2019

main subject

0 references

0 references

1 reference

J Kördel

1

1 reference

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7 November 2019

D A Pearlman

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9390401%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

W J Chazin

series ordinal

3

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7 November 2019

publication date

1 October 1997

1 reference

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Journal of Biomolecular NMR

7 November 2019

published in

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7 November 2019

volume

10

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7 November 2019

issue

3

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7 November 2019

page(s)

231-243

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On the multiple simultaneous superposition of molecular structures by rigid body transformations

7 November 2019

cites work

1 reference

12 December 2020

Molecular dynamics studies of a DNA‐binding protein: 2. An evaluation of implicit and explicit solvent models for the molecular dynamics simulation of the Escherichia coli trp repressor

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Time-averaged nuclear Overhauser effect distance restraints applied to tendamistat

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Refined solution structure of the Tyr41-->His mutant of the M13 gene V protein. A comparison with the crystal structure

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Backbone dynamics of calcium-loaded calbindin D9k studied by two-dimensional proton-detected 15N NMR spectroscopy

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12 December 2020

Accurate simulation of protein dynamics in solution

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12 December 2020

Nuclear magnetic resonance studies of the internal dynamics in Apo, (Cd2+)1 and (Ca2+)2 calbindin D9k. The rates of amide proton exchange with solvent

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12 December 2020

Proline cis-trans isomers in calbindin D9k observed by X-ray crystallography

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12 December 2020

High-resolution structure of calcium-loaded calbindin D9k

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12 December 2020

Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex

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Environment and exposure to solvent of protein atoms. Lysozyme and insulin

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12 December 2020

The interpretation of protein structures: Estimation of static accessibility

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12 December 2020

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12 December 2020

Determination of the three-dimensional structure of the Antennapedia homeodomain from Drosophila in solution by 1H nuclear magnetic resonance spectroscopy

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12 December 2020

Conformational sampling by NMR solution structures calculated with the program DIANA evaluated by comparison with long-time molecular dynamics calculations in explicit water

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12 December 2020