Deletion of Rnt1p alters the proportion of open versus closed rRNA gene repeats in yeast (Q27930297)

1 December 2016

title

Deletion of Rnt1p alters the proportion of open versus closed rRNA gene repeats in yeast (English)

1 reference

1 December 2016

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Ribonuclease III YMR239C

1 reference

GOA release 2020-03-11

author name string

Sherif Abou Elela

5

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Maxime Tremblay

2

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Mathieu Catala

1

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Eric Samson

3

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Antonio Conconi

Molecular and Cellular Biology

4

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language of work or name

English

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publication date

January 2008

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published in

1 reference

Potential interface between ribosomal protein production and pre-rRNA processing

1 December 2016

volume

28

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issue

2

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page(s)

619-29

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cites work

1 reference

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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A34.5, a nonessential component of yeast RNA polymerase I, cooperates with subunit A14 and DNA topoisomerase I to produce a functional rRNA synthesis machine

20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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The small nucleolar RNP protein NOP1 (fibrillarin) is required for pre-rRNA processing in yeast

20 March 2017

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20 March 2017

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20 March 2017

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Elevated recombination rates in transcriptionally active DNA

20 March 2017

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The economics of ribosome biosynthesis in yeast

20 March 2017

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Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1.

20 March 2017

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RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site

20 March 2017

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Transcription elongation by RNA polymerase I is linked to efficient rRNA processing and ribosome assembly.

7 April 2017

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Repair-independent chromatin assembly onto active ribosomal genes in yeast after UV irradiation.

29 September 2017

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Psoralen photocrosslinking, a tool to study the chromatin structure of RNA polymerase I--transcribed ribosomal genes

29 September 2017

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Crosstalk in gene expression: coupling and co-regulation of rDNA transcription, pre-ribosome assembly and pre-rRNA processing

29 September 2017

1 reference

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Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae

29 September 2017

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A cotranscriptional model for 3'-end processing of the Saccharomyces cerevisiae pre-ribosomal RNA precursor.

29 September 2017

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At the crossroads of growth control; making ribosomal RNA.

29 September 2017

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A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III.

29 September 2017

1 reference

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Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Life on a planet of its own: regulation of RNA polymerase I transcription in the nucleolus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

The A14-A43 heterodimer subunit in yeast RNA pol I and their relationship to Rpb4-Rpb7 pol II subunits

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Localization of the yeast RNA polymerase I-specific subunits

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

A physical interaction between Gar1p and Rnt1pi is required for the nuclear import of H/ACA small nucleolar RNA-associated proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Transcription-coupled repair in RNA polymerase I-transcribed genes of yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

The N-terminal domain that distinguishes yeast from bacterial RNase III contains a dimerization signal required for efficient double-stranded RNA cleavage

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Transcriptional activity and chromatin structure of enhancer-deleted rRNA genes in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Inactivation of topoisomerases affects transcription-dependent chromatin transitions in rDNA but not in a gene transcribed by RNA polymerase II.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Structure of the dsRNA binding domain of E. coli RNase III.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Dissociation of two polypeptide chains from yeast RNA polymerase A

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Growth factor signaling regulates elongation of RNA polymerase I transcription in mammals via UBF phosphorylation and r-chromatin remodeling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Genome-wide prediction and analysis of yeast RNase III-dependent snoRNA processing signals

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Rpa12p, a conserved RNA polymerase I subunit with two functional domains

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Regulation of RNA polymerase I transcription in yeast and vertebrates

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Different chromatin structures along the spacers flanking active and inactive Xenopus rRNA genes

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Chromatin structure of ribosomal genes in Chironomus thummi (Diptera: Chironomidae): tissue specificity and behaviour under drug treatment.

2 June 2018

1 reference

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The synthetic genetic interaction spectrum of essential genes

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Rapid changes in transcription and chromatin structure of ribosomal genes in yeast during growth phase transitions

27 November 2018

1 reference

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Evaluation of the RNA determinants for bacterial and yeast RNase III binding and cleavage.

27 November 2018

1 reference

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Yeast Rnt1p is required for cleavage of the pre-ribosomal RNA in the 3' ETS but not the 5' ETS.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Immunological studies of yeast nuclear RNA polymerases at the subunit level

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223425

Replication of yeast rDNA initiates downstream of transcriptionally active genes

27 November 2018

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12 December 2020

RNase III-mediated silencing of a glucose-dependent repressor in yeast

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12 December 2020

Chromatin structure along the ribosomal DNA of Dictyostelium. Regional differences and changes accompanying cell differentiation

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12 December 2020

Psoralen-crosslinking of DNA as a probe for the structure of active nucleolar chromatin

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12 December 2020

Structure of the extrachromosomal ribosomal RNA chromatin of Physarum polycephalum

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12 December 2020

Identifiers

1 reference

1 December 2016

0 references

1 reference