Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA. (Q27933045)

1 December 2016

title

Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA. (English)

1 reference

Cytochrome b mRNA maturase bI3 Q0115

1 December 2016

1 reference

GOA release 2020-03-11

1 reference

Proceedings of the National Academy of Sciences of the United States of America

GOA release 2020-03-11

Malcolm F White

3

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author name string

Gurminder S Bassi

series ordinal

1

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Daniela M de Oliveira

series ordinal

2

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Kevin M Weeks

series ordinal

4

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language of work or name

English

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publication date

8 January 2002

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published in

1 reference

Crystal structure of the ribosome at 5.5 A resolution

1 December 2016

volume

99

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issue

1

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page(s)

128-33

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cites work

1 reference

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The homing endonuclease I-CreI uses three metals, one of which is shared between the two active sites

20 March 2017

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Crystal structure of the thermostable archaeal intron-encoded endonuclease I-DmoI

20 March 2017

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A preorganized active site in the crystal structure of the Tetrahymena ribozyme

20 March 2017

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DNA recognition and cleavage by the LAGLIDADG homing endonuclease I-CreI

20 March 2017

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Replacement of two non-adjacent amino acids in the S.cerevisiae bi2 intron-encoded RNA maturase is sufficient to gain a homing-endonuclease activity

20 March 2017

1 reference

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Frequent use of the same tertiary motif by self-folding RNAs

20 March 2017

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Calculation of protein extinction coefficients from amino acid sequence data

20 March 2017

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Introns as mobile genetic elements

20 March 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Self-splicing of group I introns

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Ribonuclease P: a ribonucleoprotein enzyme

7 April 2017

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SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories

29 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Resolving the relationships of resolving enzymes

29 September 2017

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Statistical modeling and analysis of the LAGLIDADG family of site-specific endonucleases and identification of an intein that encodes a site-specific endonuclease of the HNH family

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

A protein encoded by a group I intron in Aspergillus nidulans directly assists RNA splicing and is a DNA endonuclease

29 September 2017

1 reference

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Synthesis of a modified gene encoding human ornithine transcarbamylase for expression in mammalian mitochondrial and universal translation systems: a novel approach towards correction of a genetic defect

29 September 2017

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Guanosine binding to the Tetrahymena ribozyme: thermodynamic coupling with oligonucleotide binding

29 September 2017

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Evolution of mobile group I introns: recognition of intron sequences by an intron-encoded endonuclease

29 September 2017

1 reference

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Substitutions in conserved dodecapeptide motifs that uncouple the DNA binding and DNA cleavage activities of PI-SceI endonuclease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Efficient protein-facilitated splicing of the yeast mitochondrial bI5 intron

29 September 2017

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Involvement of a GNRA tetraloop in long-range RNA tertiary interactions

29 September 2017

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Efficient splicing of two yeast mitochondrial introns controlled by a nuclear-encoded maturase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Group I introns as mobile genetic elements: facts and mechanistic speculations--a review

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Protein-facilitated RNA folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Multiple self-splicing introns in bacteriophage T4: evidence from autocatalytic GTP labeling of RNA in vitro

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

Protein encoded by the third intron of cytochrome b gene in Saccharomyces cerevisiae is an mRNA maturase. Analysis of mitochondrial mutants, RNA transcripts proteins and evolutionary relationships

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117526

A yeast nuclear gene, MRS1, involved in mitochondrial RNA splicing: nucleotide sequence and mutational analysis of two overlapping open reading frames on opposite strands

2 June 2018

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Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods

2 June 2018

1 reference

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Selection of a ribozyme that functions as a superior template in a self-copying reaction

2 June 2018

1 reference

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Automatic identification of group I intron cores in genomic DNA sequences.

2 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

Cloning of a nuclear gene MRS1 involved in the excision of a single group I intron (bI3) from the mitochondrial COB transcript in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

The I-Ceu I endonuclease: purification and potential role in the evolution of Chlamydomonas group I introns

21 January 2018

2 references

https://api.crossref.org/works/10.1073%2FPNAS.012579299

21 January 2018

https://pubmed.ncbi.nlm.nih.gov/11773622

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

Self-splicing activity of the mitochondrial group-I introns from Aspergillus nidulans and related introns from other species

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

The Structure-selectivity and Sequence-preference of the Junction-resolving Enzyme CCE1 ofSaccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

Site-directed Mutagenesis of the Yeast Resolving Enzyme Cce1 Reveals Catalytic Residues and Relationship with the Intron-splicing Factor Mrs1

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

Quantitation of Metal Ion and DNA Junction Binding to the Holliday Junction Endonuclease Cce1†

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

Protein-dependent transition states for ribonucleoprotein assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012579299

21 January 2018

Identifiers

DOI

10.1073/PNAS.012579299

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1 reference