The ATP-dependent chromatin remodeling enzyme Fun30 represses transcription by sliding promoter-proximal nucleosomes. (Q27934467)

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

The ATP-dependent chromatin remodeling enzyme Fun30 represses transcription by sliding promoter-proximal nucleosomes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

DNA-dependent ATPase FUN30 YAL019W

3 March 2020

main subject

cell biology

0 references

1 reference

GOA release 2020-03-11

author

Artem Barski

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

author name string

Boseon Byeon

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Wei Wang

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Ryan T Ranallo

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Kan Bao

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Dustin E Schones

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Keji Zhao

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Carl Wu

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Wei-Hua Wu

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

language of work or name

English

0 references

publication date

18 June 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

3 March 2020

number of pages

12

1 reference

based on heuristic

inferred from page(s)

published in

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

volume

288

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

issue

32

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

page(s)

23182-23193

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

3 March 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3743490

based on heuristic

inferred from PubMed Central ID database lookup

cites work

SWI/SNF-like chromatin remodeling factor Fun30 supports point centromere function in S. cerevisiae.

1 reference

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The yeast Fun30 and human SMARCAD1 chromatin remodellers promote DNA end resection

20 March 2017

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The Fun30 nucleosome remodeller promotes resection of DNA double-strand break ends.

20 March 2017

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Maintenance of silent chromatin through replication requires SWI/SNF-like chromatin remodeler SMARCAD1

20 March 2017

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Roles of chromatin remodeling factors in the formation and maintenance of heterochromatin structure

20 March 2017

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Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity

20 March 2017

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The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor

20 March 2017

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Stepwise histone replacement by SWR1 requires dual activation with histone H2A.Z and canonical nucleosome

20 March 2017

1 reference

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The Snf2 homolog Fun30 acts as a homodimeric ATP-dependent chromatin-remodeling enzyme

20 March 2017

1 reference

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The SNF2-family member Fun30 promotes gene silencing in heterochromatic loci

20 March 2017

1 reference

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Chromatin remodelling at promoters suppresses antisense transcription

20 March 2017

1 reference

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Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

20 March 2017

1 reference

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Two distinct mechanisms of chromatin interaction by the Isw2 chromatin remodeling complex in vivo

20 March 2017

1 reference

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A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1.

20 March 2017

1 reference

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ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

20 March 2017

1 reference

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The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p

20 March 2017

1 reference

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A chromatin remodelling complex involved in transcription and DNA processing.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Crystal structure of the nucleosome core particle at 2.8 A resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

A multisubunit complex containing the SWI1/ADR6, SWI2/SNF2, SWI3, SNF5, and SNF6 gene products isolated from yeast

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Histone variants--ancient wrap artists of the epigenome

20 March 2017

1 reference

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The biology of chromatin remodeling complexes

20 March 2017

1 reference

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Bidirectional promoters generate pervasive transcription in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Genome-wide map of nucleosome acetylation and methylation in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Nucleosome remodelers in double-strand break repair.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Stabilization of the promoter nucleosomes in nucleosome-free regions by the yeast Cyc8-Tup1 corepressor.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Chromatin and transcription in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Genome-wide function of H2B ubiquitylation in promoter and genic regions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Genome-wide "re"-modeling of nucleosome positions.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Nucleosome positioning in Saccharomyces cerevisiae.

29 September 2017

1 reference

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Diversity of operation in ATP-dependent chromatin remodelers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Histone variants in metazoan development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

A proposal for kinetic proof reading by ISWI family chromatin remodeling motors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Nucleosome dynamics and histone variants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Chromatin remodeling around nucleosome-free regions leads to repression of noncoding RNA transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Histone H2B ubiquitination and beyond: Regulation of nucleosome stability, chromatin dynamics and the trans-histone H3 methylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Reconciling the positive and negative roles of histone H2A.Z in gene transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Chaperoning histones during DNA replication and repair

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

High-resolution nucleosome mapping reveals transcription-dependent promoter packaging

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

The logic of chromatin architecture and remodelling at promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

What controls nucleosome positions?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Chromatin remodelling beyond transcription: the INO80 and SWR1 complexes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Mechanisms that specify promoter nucleosome location and identity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Nucleosome positioning and gene regulation: advances through genomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Genome-wide approaches to studying chromatin modifications

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Snf2 family ATPases and DExx box helicases: differences and unifying concepts from high-resolution crystal structures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Genome-scale identification of nucleosome positions in S. cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Principles for the buffering of genetic variation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

ISWI, a member of the SWI2/SNF2 ATPase family, encodes the 140 kDa subunit of the nucleosome remodeling factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: analysis of the genes in the FUN38-MAK16-SPO7 region

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Identification of a Saccharomyces cerevisiae homolog of the SNF2 transcriptional regulator in the DNA sequence of an 8.6 kb region in the LTE1-CYS1 interval on the left arm of chromosome I

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

The Saccharomyces cerevisiae chromatin remodeler Fun30 regulates DNA end resection and checkpoint deactivation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Genome-wide nucleosome specificity and directionality of chromatin remodelers.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

A map of nucleosome positions in yeast at base-pair resolution

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

Natural history and evolutionary principles of gene duplication in fungi

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3743490

MicroRNA control of signal transduction

2 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M113.471979

Biochemical assay for histone H2A.Z replacement by the yeast SWR1 chromatin remodeling complex.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M113.471979

ATP-dependent histone octamer sliding mediated by the chromatin remodeling complex NURF.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M113.471979

Mapping of nucleosome positions

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23779104

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M113.471979

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23779104%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

2 references

1 December 2016