Kinetic mechanism for single-stranded DNA binding and translocation by Saccharomyces cerevisiae Isw2. (Q27935510)

1 December 2016

title

Kinetic mechanism for single-stranded DNA binding and translocation by Saccharomyces cerevisiae Isw2. (English)

1 reference

1 December 2016

main subject

Saccharomyces cerevisiae

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DNA translocase YOR304W

1 reference

GOA release 2020-03-11

author name string

Christopher J Fischer

series ordinal

1

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Daniel J Fitzgerald

series ordinal

3

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language of work or name

English

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publication date

7 April 2009

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1 reference

Kinetic model for the ATP-dependent translocation of Saccharomyces cerevisiae RSC along double-stranded DNA.

1 December 2016

volume

48

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page(s)

2960-8

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

The Isw2 chromatin-remodeling ATPase cooperates with the Fkh2 transcription factor to repress transcription of the B-type cyclin gene CLB2

20 March 2017

1 reference

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DNA translocation and loop formation mechanism of chromatin remodeling by SWI/SNF and RSC.

20 March 2017

1 reference

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Direct observation of DNA distortion by the RSC complex

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Histone fold protein Dls1p is required for Isw2-dependent chromatin remodeling in vivo

20 March 2017

1 reference

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High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Chromatin remodeling by RSC involves ATP-dependent DNA translocation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

In vivo chromatin remodeling by yeast ISWI homologs Isw1p and Isw2p

20 March 2017

1 reference

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The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

20 March 2017

1 reference

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ATP-dependent chromatin remodeling shapes the DNA replication landscape

20 March 2017

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Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions

20 March 2017

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Conformational flexibility in the chromatin remodeler RSC observed by electron microscopy and the orthogonal tilt reconstruction method

7 April 2017

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Mechanisms of ATP dependent chromatin remodeling

29 September 2017

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Autoinhibition of Escherichia coli Rep monomer helicase activity by its 2B subdomain

29 September 2017

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ATP-dependent translocation of proteins along single-stranded DNA: models and methods of analysis of pre-steady state kinetics

29 September 2017

1 reference

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Functional role of extranucleosomal DNA and the entry site of the nucleosome in chromatin remodeling by ISW2.

29 September 2017

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Reaction cycle of the yeast Isw2 chromatin remodeling complex.

29 September 2017

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Topography of the ISW2-nucleosome complex: insights into nucleosome spacing and chromatin remodeling

29 September 2017

1 reference

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Chromatin remodeling in vivo: evidence for a nucleosome sliding mechanism

29 September 2017

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Evidence for DNA translocation by the ISWI chromatin-remodeling enzyme

29 September 2017

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Direct measurement of single-stranded DNA translocation by PcrA helicase using the fluorescent base analogue 2-aminopurine

29 September 2017

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Nucleosome mobilization and positioning by ISWI-containing chromatin-remodeling factors

29 September 2017

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Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression

29 September 2017

1 reference

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Defining the roles of individual residues in the single-stranded DNA binding site of PcrA helicase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Interactions of Isw2 chromatin remodeling complex with nucleosomal arrays: analyses using recombinant yeast histones and immobilized templates

29 September 2017

1 reference

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Uncoupling DNA translocation and helicase activity in PcrA: direct evidence for an active mechanism.

29 September 2017

1 reference

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Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae

29 September 2017

1 reference

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Perturbation of nucleosome core structure by the SWI/SNF complex persists after its detachment, enhancing subsequent transcription factor binding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

A continuous spectrophotometric assay for inorganic phosphate and for measuring phosphate release kinetics in biological systems

29 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA

29 September 2017

1 reference

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Genome-wide identification of Isw2 chromatin-remodeling targets by localization of a catalytically inactive mutant

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Mechanism of ATP-dependent translocation of E.coli UvrD monomers along single-stranded DNA.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Chromatin remodeling through directional DNA translocation from an internal nucleosomal site

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

T7 DNA helicase: a molecular motor that processively and unidirectionally translocates along single-stranded DNA.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Functional Delineation of Three Groups of the ATP-dependent Family of Chromatin Remodeling Enzymes

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Demonstration of unidirectional single-stranded DNA translocation by PcrA helicase: measurement of step size and translocation speed

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Activated RSC-nucleosome complex and persistently altered form of the nucleosome

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772680

Mechanisms for ATP-dependent chromatin remodelling

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/19203228

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetic mechanism of DNA binding and DNA-induced dimerization of the Escherichia coli Rep helicase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19203228

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

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1 reference