Identification of the yeast cytidine deaminase CDD1 as an orphan C--&gt;U RNA editase (Q27938986)

GOA release 2020-03-11

author name string

G S Dance

1

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P Beemiller

2

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Y Yang

3

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D V Mater

4

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I S Mian

5

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H C Smith

Erv1p from Saccharomyces cerevisiae is a FAD-linked sulfhydryl oxidase

6

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language of work or name

English

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publication date

15 April 2001

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published in

Nucleic Acids Research

1 reference

1 December 2016

29

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issue

8

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page(s)

1772-80

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cites work

1 reference

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Molecular cloning of apobec-1 complementation factor, a novel RNA-binding protein involved in the editing of apolipoprotein B mRNA.

20 March 2017

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An adenosine deaminase that generates inosine at the wobble position of tRNAs

20 March 2017

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New insights into the pyrimidine salvage pathway of Saccharomyces cerevisiae: requirement of six genes for cytidine metabolism

20 March 2017

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APOBEC-2, a cardiac- and skeletal muscle-specific member of the cytidine deaminase supergene family

20 March 2017

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Tad1p, a yeast tRNA-specific adenosine deaminase, is related to the mammalian pre-mRNA editing enzymes ADAR1 and ADAR2.

20 March 2017

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Cloning of an Apobec-1-binding protein that also interacts with apolipoprotein B mRNA and evidence for its involvement in RNA editing

20 March 2017

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Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases

20 March 2017

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The neurofibromatosis type I messenger RNA undergoes base-modification RNA editing

20 March 2017

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An auxiliary factor containing a 240-kDa protein complex is involved in apolipoprotein B RNA editing

20 March 2017

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Evolutionary origins of apoB mRNA editing: catalysis by a cytidine deaminase that has acquired a novel RNA-binding motif at its active site

20 March 2017

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Sequence and expression of the dCMP deaminase gene (DCD1) of Saccharomyces cerevisiae

20 March 2017

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Three distinct RNA sequence elements are required for efficient apolipoprotein B (apoB) RNA editing in vitro

20 March 2017

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Induction of cytidine to uridine editing on cytoplasmic apolipoprotein B mRNA by overexpressing APOBEC-1

20 March 2017

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Psoriasis upregulated phorbolin-1 shares structural but not functional similarity to the mRNA-editing protein apobec-1

20 March 2017

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Escherichia coli cytidine deaminase provides a molecular model for ApoB RNA editing and a mechanism for RNA substrate recognition

20 March 2017

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Tissue-specific inhibition of apolipoprotein B mRNA editing in the liver by adenovirus-mediated transfer of a dominant negative mutant APOBEC-1 leads to increased low density lipoprotein in mice

20 March 2017

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Hidden Markov models for sequence analysis: extension and analysis of the basic method

20 March 2017

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Apolipoprotein B mRNA editing is an intranuclear event that occurs posttranscriptionally coincident with splicing and polyadenylation

20 March 2017

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Sequence requirements for the editing of apolipoprotein B mRNA

20 March 2017

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Specific expression of activation-induced cytidine deaminase (AID), a novel member of the RNA-editing deaminase family in germinal center B cells

20 March 2017

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Multiple protein domains determine the cell type-specific nuclear distribution of the catalytic subunit required for apolipoprotein B mRNA editing

20 March 2017

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A novel translational repressor mRNA is edited extensively in livers containing tumors caused by the transgene expression of the apoB mRNA-editing enzyme

20 March 2017

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Molecular cloning of an apolipoprotein B messenger RNA editing protein

20 March 2017

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Hidden Markov models in computational biology. Applications to protein modeling

20 March 2017

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Changing genetic information through RNA editing

7 April 2017

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APOBEC-1 dependent cytidine to uridine editing of apolipoprotein B RNA in yeast

29 September 2017

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Analysis of protein complexes assembled on apolipoprotein B mRNA for mooring sequence-dependent RNA editing.

29 September 2017

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Partial characterization of the auxiliary factors involved in apolipoprotein B mRNA editing through APOBEC-1 affinity chromatography.

29 September 2017

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Base-modification mRNA editing through deamination--the good, the bad and the unregulated.

29 September 2017

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Determinants involved in regulating the proportion of edited apolipoprotein B RNAs

29 September 2017

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Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1

29 September 2017

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Apolipoprotein B mRNA editing is associated with UV crosslinking of proteins to the editing site

29 September 2017

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Cytidine deaminase. The 2.3 A crystal structure of an enzyme: transition-state analog complex

29 September 2017

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Apolipoprotein B mRNA editing: the sequence to the event

29 September 2017

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Only cytidines 5' of the apolipoprotein B mRNA mooring sequence are edited.

29 September 2017

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Cloning and sequence analysis of the rat augmenter of liver regeneration (ALR) gene: expression of biologically active recombinant ALR and demonstration of tissue distribution

29 September 2017

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Pyrimidine Nucleotide Metabolism and Pathways of Thymidine Triphosphate Biosynthesis in Salmonella typhimurium

29 September 2017

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A 40 kilodalton rat liver nuclear protein binds specifically to apolipoprotein B mRNA around the RNA editing site

29 September 2017

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In vitro apolipoprotein B mRNA editing: identification of a 27S editing complex

29 September 2017

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Cloning, expression, and purification of cytidine deaminase from Arabidopsis thaliana

29 September 2017

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2 June 2018

A guide to RNA editing.

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Recombinant human cytidine deaminase: expression, purification, and characterization

2 June 2018

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Cytidine deaminase from Escherichia coli B. Purification and enzymatic and molecular properties.

2 June 2018

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Characterization of the apolipoprotein B mRNA editing activity in enterocyte extracts.

2 June 2018

1 reference

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Generation of 5-fluorouracil from 5-fluorocytosine by monoclonal antibody-cytosine deaminase conjugates

2 June 2018

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Methods for studying the yeast vacuole

2 June 2018

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Characterization of apolipoprotein B mRNA editing from rabbit intestine

2 June 2018

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Statistical modelling and phylogenetic analysis of a deaminase domain

2 June 2018

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A standardized nomenclature for adenosine deaminases that act on RNA.

27 November 2018

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27 November 2018

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27 November 2018

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27 November 2018

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12 December 2020

Extract-specific heterogeneity in high-order complexes containing apolipoprotein B mRNA editing activity and RNA-binding proteins

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12 December 2020

Specific 3' sequences flanking a minimal apolipoprotein B (apoB) mRNA editing 'cassette' are critical for efficient editing in vitro

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12 December 2020

apobec-1, the catalytic subunit of the mammalian apolipoprotein B mRNA editing enzyme, is a novel RNA-binding protein

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12 December 2020

Cytidine deaminases from B. subtilis and E. coli: compensating effects of changing zinc coordination and quaternary structure

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12 December 2020

Disproportionate relationship between APOBEC-1 expression and apolipoprotein B mRNA editing activity

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12 December 2020

The binding of apobec-1 to mammalian apo B RNA is stabilized by the presence of complementation factors which are required for post-transcriptional editing

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12 December 2020