Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene (Q27938987)

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English	Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene	scientific article

Statements

scholarly article

1 reference

PubMed publication ID

1 December 2016

Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene (English)

1 reference

PubMed publication ID

1 December 2016

Histone acetyltransferase YGR274C

1 reference

GOA release 2020-03-11

author name string

Y Tsukihashi

1

0 references

T Miyake

2

0 references

M Kawaichi

3

0 references

T Kokubo

4

0 references

language of work or name

0 references

publication date

April 2000

0 references

Molecular and Cellular Biology

1 reference

PubMed publication ID

1 December 2016

20

0 references

7

0 references

2385-99

0 references

DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator

1 reference

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Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction

1 reference

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20 March 2017

Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB.

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20 March 2017

The histone H3-like TAF is broadly required for transcription in yeast

1 reference

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20 March 2017

Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex

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20 March 2017

ADR1-mediated transcriptional activation requires the presence of an intact TFIID complex

1 reference

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20 March 2017

A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID

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20 March 2017

A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

20 March 2017

Histone-like TAFs within the PCAF histone acetylase complex

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20 March 2017

Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II

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20 March 2017

The Med proteins of yeast and their function through the RNA polymerase II carboxy-terminal domain

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20 March 2017

CIF150, a human cofactor for transcription factor IID-dependent initiator function

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20 March 2017

Yeast TAF(II)145 functions as a core promoter selectivity factor, not a general coactivator

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20 March 2017

Yeast TAF(II)145 required for transcription of G1/S cyclin genes and regulated by the cellular growth state

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20 March 2017

Genetic analysis of the large subunit of yeast transcription factor IIE reveals two regions with distinct functions

1 reference

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20 March 2017

The TAF(II)250 subunit of TFIID has histone acetyltransferase activity

1 reference

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20 March 2017

Three functional classes of transcriptional activation domain

1 reference

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20 March 2017

TAFII250 is a bipartite protein kinase that phosphorylates the base transcription factor RAP74

1 reference

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Pattern of aromatic and hydrophobic amino acids critical for one of two subdomains of the VP16 transcriptional activator

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20 March 2017

A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II.

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20 March 2017

The transcriptional activator GCN4 contains multiple activation domains that are critically dependent on hydrophobic amino acids

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20 March 2017

General requirement for RNA polymerase II holoenzymes in vivo

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20 March 2017

Cloning and expression of human TAFII250: a TBP-associated factor implicated in cell-cycle regulation

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20 March 2017

Rapid and efficient site-specific mutagenesis without phenotypic selection

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20 March 2017

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

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20 March 2017

The human CCG1 gene, essential for progression of the G1 phase, encodes a 210-kilodalton nuclear DNA-binding protein

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20 March 2017

5-Fluoroorotic acid as a selective agent in yeast molecular genetics

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20 March 2017

Dissecting the regulatory circuitry of a eukaryotic genome

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20 March 2017

New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites

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20 March 2017

The TAFs in the HAT

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20 March 2017

The general transcription factors of RNA polymerase II

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20 March 2017

Isolation of coactivators associated with the TATA-binding protein that mediate transcriptional activation

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20 March 2017

Regulation of gene expression by TBP-associated proteins

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20 March 2017

Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

Transcriptional activation by recruitment

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

TAFs mediate transcriptional activation and promoter selectivity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

The role of general initiation factors in transcription by RNA polymerase II

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

Five intermediate complexes in transcription initiation by RNA polymerase II

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

Transcriptional activators direct histone acetyltransferase complexes to nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

Biochemistry and structural biology of transcription factor IID (TFIID)

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

7 April 2017

An RNA polymerase II holoenzyme responsive to activators

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7 April 2017

The RNA polymerase II holoenzyme and its implications for gene regulation

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7 April 2017

TFIID-specific yeast TAF40 is essential for the majority of RNA polymerase II-mediated transcription in vivo

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

A TATA-binding protein mutant defective for TFIID complex formation in vivo

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29 September 2017

Thyroid hormone receptor-associated proteins and general positive cofactors mediate thyroid hormone receptor function in the absence of the TATA box-binding protein-associated factors of TFIID.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Activation domain-specific and general transcription stimulation by native histone acetyltransferase complexes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Broad, but not universal, transcriptional requirement for yTAFII17, a histone H3-like TAFII present in TFIID and SAGA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

TAFII mutations disrupt Dorsal activation in the Drosophila embryo

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29 September 2017

RNA polymerase II holoenzymes and subcomplexes.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Activation of chromosomal DNA replication in Saccharomyces cerevisiae by acidic transcriptional activation domains

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29 September 2017

The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Mechanism of synergy between TATA and initiator: synergistic binding of TFIID following a putative TFIIA-induced isomerization

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29 September 2017

TAFII250-dependent transcription of cyclin A is directed by ATF activator proteins

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Structure-function analysis of the Saccharomyces cerevisiae G1 cyclin Cln2.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

The ts13 mutation in the TAF(II)250 subunit (CCG1) of TFIID directly affects transcription of D-type cyclin genes in cells arrested in G1 at the nonpermissive temperature

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Structure-function analysis of TAF130: identification and characterization of a high-affinity TATA-binding protein interaction domain in the N terminus of yeast TAF(II)130

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

D-type cyclin expression is decreased and p21 and p27 CDK inhibitor expression is increased when tsBN462 CCG1/TAFII250 mutant cells arrest in G1 at the restrictive temperature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

The biochemistry of transcription in eukaryotes: a paradigm for multisubunit regulatory complexes

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29 September 2017

Absolute mRNA levels and transcriptional initiation rates in Saccharomyces cerevisiae

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29 September 2017

Core promoter-specific function of a mutant transcription factor TFIID defective in TATA-box binding

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Cell cycle-dependent transcription of CLN2 is conferred by multiple distinct cis-acting regulatory elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

RAP1: a protean regulator in yeast.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

GAL4 interacts with TATA-binding protein and coactivators

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Core promoter specificities of the Sp1 and VP16 transcriptional activation domains

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Efficient expression of the Saccharomyces cerevisiae PGK gene depends on an upstream activation sequence but does not require TATA sequences

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

29 September 2017

Isolation and DNA-binding characteristics of a protein involved in transcription activation of two divergently transcribed, essential yeast genes

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29 September 2017

Identification and comparison of stable and unstable mRNAs in Saccharomyces cerevisiae

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29 September 2017

Randomization of genes by PCR mutagenesis

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29 September 2017

A region of herpes simplex virus VP16 can substitute for a transforming domain of Epstein-Barr virus nuclear protein 2

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29 September 2017

The SAGA unfolds: convergence of transcription regulators in chromatin-modifying complexes.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

TAFII-independent activation mediated by human TBP in the presence of the positive cofactor PC4

1 reference

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2 June 2018

Transcription activation via enhanced preinitiation complex assembly in a human cell-free system lacking TAFIIs

1 reference

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2 June 2018

General transcription factors for RNA polymerase II.

1 reference

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2 June 2018

TAFs: guilt by association?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

Mechanisms of transcriptional activation: differences and similarities between yeast, Drosophila, and man.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

Assembly of the isomerized TFIIA--TFIID--TATA ternary complex is necessary and sufficient for gene activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

TBP-associated factors are not generally required for transcriptional activation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

The p250 subunit of native TATA box-binding factor TFIID is the cell-cycle regulatory protein CCG1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

Identification of TFIID components required for transcriptional activation by upstream stimulatory factor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

Promoter-selective transcriptional defect in cell cycle mutant ts13 rescued by hTAFII250.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

The CCG1/TAFII250 gene is mutated in thermosensitive G1 mutants of the BHK21 cell line derived from golden hamster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

2 June 2018

Expression of thymidine kinase and dihydrofolate reductase genes in mammalian ts mutants of the cell cycle

1 reference

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2 June 2018

Factors involved in specific transcription by mammalian RNA polymerase II. Identification and characterization of factor IIH

1 reference

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20 June 2018

TAF25p, a non-histone-like subunit of TFIID and SAGA complexes, is essential for total mRNA gene transcription in vivo

1 reference

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27 November 2018

Identification of highly conserved amino-terminal segments of dTAFII230 and yTAFII145 that are functionally interchangeable for inhibiting TBP-DNA interactions in vitro and in promoting yeast cell growth in vivo.

1 reference

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27 November 2018

Transcription activation in cells lacking TAFIIS.

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27 November 2018

The yeast homolog of mammalian ribosomal protein S30 is expressed from a duplicated gene without a ubiquitin-like protein fusion sequence. Evolutionary implications

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27 November 2018

Increased recruitment of TATA-binding protein to the promoter by transcriptional activation domains in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85416

27 November 2018

A mechanism for TAFs in transcriptional activation: activation domain enhancement of TFIID-TFIIA--promoter DNA complex formation

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The role of TAFs in RNA polymerase II transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histone-like TAFs are essential for transcription in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

yTAFII61 has a general role in RNA polymerase II transcription and is required by Gcn4p to recruit the SAGA coactivator complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global transcription regulators of eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhancement of TBP binding by activators and general transcription factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Topology and reorganization of a human TFIID–promoter complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organization of the Saccharomyces cerevisiae actin gene UAS: functional significance of reiterated REB1 binding sites and AT-rich elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A positive regulatory gene is required for accumulation of the functional messenger RNA for the glucose-repressible alcohol dehydrogenase from Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient expression of the Saccharomyces cerevisiae glycolytic gene ADH1 is dependent upon a cis-acting regulatory element (UASRPG) found initially in genes encoding ribosomal proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/10713163

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.20.7.2385-2399.2000

0 references

PMC publication ID

0 references

PubMed publication ID

1 reference

PubMed publication ID

1 December 2016

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