Control of Ubp3 ubiquitin protease activity by the Hog1 SAPK modulates transcription upon osmostress. (Q27940376)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Control of Ubp3 ubiquitin protease activity by the Hog1 SAPK modulates transcription upon osmostress (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

MRNA-binding ubiquitin-specific protease UBP3 YER151C

7 February 2020

main subject

1 reference

Mitogen-activated protein kinase HOG1 YLR113W

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author

Carme Solé Vendrell

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Claudine Kraft

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Laia de Nadal

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Mariona Nadal-Ribelles

2

object named as

Mariona Nadal-Ribelles

1 reference

7 February 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

Matthias Peter

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Francesc Posas

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

language of work or name

English

0 references

publication date

8 July 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

2 references

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

volume

30

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

issue

16

1 reference

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7 February 2020

page(s)

3274-3284

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy

7 February 2020

cites work

1 reference

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Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes

20 March 2017

1 reference

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Reversal of RNA polymerase II ubiquitylation by the ubiquitin protease Ubp3.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Molecular Basis for Bre5 Cofactor Recognition by the Ubp3 Deubiquitylating Enzyme

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Purification of active TFIID from Saccharomyces cerevisiae. Extensive promoter contacts and co-activator function

20 March 2017

1 reference

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The MAPK Hog1 recruits Rpd3 histone deacetylase to activate osmoresponsive genes.

20 March 2017

1 reference

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Deubiquitination, a New Player in Golgi to Endoplasmic Reticulum Retrograde Transport

20 March 2017

1 reference

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Ubp3 requires a cofactor, Bre5, to specifically de-ubiquitinate the COPII protein, Sec23.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Osmostress-induced transcription by Hot1 depends on a Hog1-mediated recruitment of the RNA Pol II.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Targeting the MEF2-like transcription factor Smp1 by the stress-activated Hog1 mitogen-activated protein kinase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Stress-induced map kinase Hog1 is part of transcription activation complexes.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Negative regulation of Gcn4 and Msn2 transcription factors by Srb10 cyclin-dependent kinase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Regulation of the Sko1 transcriptional repressor by the Hog1 MAP kinase in response to osmotic stress

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Rck2 kinase is a substrate for the osmotic stress-activated mitogen-activated protein kinase Hog1.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Nuclear localization of the C2H2 zinc finger protein Msn2p is regulated by stress and protein kinase A activity

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Ubiquitin-specific proteases of Saccharomyces cerevisiae. Cloning of UBP2 and UBP3, and functional analysis of the UBP gene family

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Systematic genetic analysis with ordered arrays of yeast deletion mutants

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

The tandem affinity purification (TAP) method: a general procedure of protein complex purification

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Breaking the chains: structure and function of the deubiquitinases

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Mechanism and function of deubiquitinating enzymes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Osmotic stress signaling and osmoadaptation in yeasts

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Toward a genomic view of the gene expression program regulated by osmostress in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Inducible gene expression: diverse regulatory mechanisms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Multilayered control of gene expression by stress-activated protein kinases.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Dynamic and complex transcription factor binding during an inducible response in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Control of cell cycle in response to osmostress: lessons from yeast.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Deubiquitinating enzymes: their functions and substrate specificity.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

The yeast ubiquitin protease, Ubp3p, promotes protein stability

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

The stress-activated protein kinase Hog1 mediates S phase delay in response to osmostress

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Structure and function of a transcriptional network activated by the MAPK Hog1.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Selective requirement for SAGA in Hog1-mediated gene expression depending on the severity of the external osmostress conditions

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3160652

Atg19p ubiquitination and the cytoplasm to vacuole trafficking pathway in yeast

2 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

The Bre5/Ubp3 ubiquitin protease complex from budding yeast contributes to the cellular response to DNA damage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

Structural basis for interaction between the Ubp3 deubiquitinating enzyme and its Bre5 cofactor

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

A deubiquitinating enzyme interacts with SIR4 and regulates silencing in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

Genome-wide location analysis of the stress-activated MAP kinase Hog1 in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

The Stress-Activated Hog1 Kinase Is a Selective Transcriptional Elongation Factor for Genes Responding to Osmotic Stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.227

Activated signal transduction kinases frequently occupy target genes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21743437

12 December 2020

inferred from PubMed ID database lookup

blm3-1 is an allele of UBP3, a ubiquitin protease that appears to act during transcription of damaged DNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21743437

12 December 2020

inferred from PubMed ID database lookup

Transcriptional activation requires protection of the TATA-binding protein Tbp1 by the ubiquitin-specific protease Ubp3

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21743437

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/EMBOJ.2011.227

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

release_qpdkz7urkvhqziwwev3ligvouy

7 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qpdkz7urkvhqziwwev3ligvouy

24 November 2022

mapped directly with Wikidata item

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21743437%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

2 references