Hyperphosphorylated C-terminal repeat domain-associating proteins in the nuclear proteome link transcription to DNA/chromatin modification and RNA processing (Q28207148)

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scientific article (publication date: August 2002)

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English	Hyperphosphorylated C-terminal repeat domain-associating proteins in the nuclear proteome link transcription to DNA/chromatin modification and RNA processing	scientific article (publication date: August 2002)

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scholarly article

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Hyperphosphorylated C-terminal repeat domain-associating proteins in the nuclear proteome link transcription to DNA/chromatin modification and RNA processing (English)

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author name string

Sherry M Carty

1

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Arno L Greenleaf

2

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language of work or name

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publication date

August 2002

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Molecular & Cellular Proteomics

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1

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8

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598-610

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Tails of RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Locus-specific variation in phosphorylation state of RNA polymerase II in vivo: correlations with gene activity and transcript processing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Phosphorylation of RNA polymerase II C-terminal domain and transcriptional elongation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Phosphorylation of the C-terminal domain of RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Structural studies of a synthetic peptide derived from the carboxyl-terminal domain of RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Conformation of the RNA polymerase II C-terminal domain: circular dichroism of long and short fragments.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Coupling RNA polymerase II transcription with pre-mRNA processing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The mRNA assembly line: transcription and processing machines in the same factory

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A CTD function linking transcription to splicing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Co-transcriptional splicing of pre-messenger RNAs: considerations for the mechanism of alternative splicing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Integrating mRNA processing with transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

An extensive network of coupling among gene expression machines

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Phosphorylated RNA polymerase II stimulates pre-mRNA splicing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Allosteric interactions between capping enzyme subunits and the RNA polymerase II carboxy-terminal domain

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Cajal bodies: the first 100 years

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Mammalian capping enzyme complements mutant Saccharomyces cerevisiae lacking mRNA guanylyltransferase and selectively binds the elongating form of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The C-terminal domain of RNA polymerase II couples mRNA processing to transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Protein-interaction modules that organize nuclear function: FF domains of CA150 bind the phosphoCTD of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The C-terminal domain of the largest subunit of RNA polymerase II interacts with a novel set of serine/arginine-rich proteins

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A serine/arginine-rich nuclear matrix cyclophilin interacts with the C-terminal domain of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Phospho-carboxyl-terminal domain binding and the role of a prolyl isomerase in pre-mRNA 3'-End formation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A human RNA polymerase II complex containing factors that modify chromatin structure

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Direct interaction of the KRAB/Cys2-His2 zinc finger protein ZNF74 with a hyperphosphorylated form of the RNA polymerase II largest subunit

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A protein kinase that phosphorylates the C-terminal repeat domain of the largest subunit of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Assaying CTD kinases in vitro and phosphorylation-modulated properties of RNA polymerase II in vivo

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

DNA polymerase delta is required for human mismatch repair in vitro

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A specific isoform of hnRNP D interacts with DNA in the LR1 heterodimer: canonical RNA binding motifs in a sequence-specific duplex DNA binding protein

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Physical Isolation of Nascent RNA Chains Transcribed by RNA Polymerase II: Evidence for Cotranscriptional Splicing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

SMN interacts with a novel family of hnRNP and spliceosomal proteins

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Two-hybrid cloning identifies an RNA-binding protein, GRY-RBP, as a component of apobec-1 editosome

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Transcription elongation factor P-TEFb is required for HIV-1 tat transactivation in vitro

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Evolution of cyclin-dependent kinases (CDKs) and CDK-activating kinases (CAKs): differential conservation of CAKs in yeast and metazoa

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

P-TEFb, a cyclin-dependent kinase controlling elongation by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Modulation of RNA polymerase II elongation efficiency by C-terminal heptapeptide repeat domain kinase I.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Phosphorylation of RNA polymerase II CTD fragments results in tight binding to the WW domain from the yeast prolyl isomerase Ess1.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The length, phosphorylation state, and primary structure of the RNA polymerase II carboxyl-terminal domain dictate interactions with mRNA capping enzymes.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Dynamic association of capping enzymes with transcribing RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A nuclear matrix protein interacts with the phosphorylated C-terminal domain of RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Transcription generates positively and negatively supercoiled domains in the template.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Involvement of DNA topoisomerase I in transcription of human ribosomal RNA genes.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The organization of replication and transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

DNA topoisomerase I is involved in both repression and activation of transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Topoisomerase I enhances TFIID-TFIIA complex assembly during activation of transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Targeting to transcriptionally active loci by the hydrophilic N-terminal domain of Drosophila DNA topoisomerase I.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The DNA methyltransferases of mammals

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Transcription of IAP endogenous retroviruses is constrained by cytosine methylation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Cytosine methylation and the ecology of intragenomic parasites

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Cytosine methylation and mammalian development

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Roles of cell division and gene transcription in the methylation of CpG islands.

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Poly(ADP-ribosyl)ation: a posttranslational protein modification linked with genome protection and mammalian longevity

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Physiology and pathophysiology of poly(ADP-ribosyl)ation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A cellular survival switch: poly(ADP-ribosyl)ation stimulates DNA repair and silences transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The enzymatic and DNA binding activity of PARP-1 are not required for NF-kappa B coactivator function

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Identification of poly(ADP-ribose) polymerase as a transcriptional coactivator of the human T-cell leukemia virus type 1 Tax protein

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Poly(ADP-ribose) polymerase enhances activator-dependent transcription in vitro

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Inhibition of nuclear receptor signalling by poly(ADP-ribose) polymerase

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A B-cell-specific DNA recombination complex

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

G4 DNA binding by LR1 and its subunits, nucleolin and hnRNP D, A role for G-G pairing in immunoglobulin switch recombination

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

CA150, a nuclear protein associated with the RNA polymerase II holoenzyme, is involved in Tat-activated human immunodeficiency virus type 1 transcription

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Transcriptional cofactor CA150 regulates RNA polymerase II elongation in a TATA-box-dependent manner

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The transcription elongation factor CA150 interacts with RNA polymerase II and the pre-mRNA splicing factor SF1

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The glucocorticoid receptor is associated with the RNA-binding nuclear matrix protein hnRNP U

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Effects of the heterogeneous nuclear ribonucleoprotein U (hnRNP U/SAF-A) on glucocorticoid-dependent transcription in vivo

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

hnRNP U inhibits carboxy-terminal domain phosphorylation by TFIIH and represses RNA polymerase II elongation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

The scaffold/matrix attachment region binding protein hnRNP-U (SAF-A) is directly bound to chromosomal DNA in vivo: a chemical cross-linking study

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Transcription-dependent redistribution of the large subunit of RNA polymerase II to discrete nuclear domains

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Specific interaction of Smn, the spinal muscular atrophy determining gene product, with hnRNP-R and gry-rbp/hnRNP-Q: a role for Smn in RNA processing in motor axons?

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

A functional interaction between the survival motor neuron complex and RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Disassembly of interchromatin granule clusters alters the coordination of transcription and pre-mRNA splicing

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Cytosine methylation and human cancer

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

DNA hypermethylation in tumorigenesis: epigenetics joins genetics

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Structure and function of the mouse DNA methyltransferase gene: Dnmt1 shows a tripartite structure

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Positive patches and negative noodles: linking RNA processing to transcription?

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Yeast carboxyl-terminal domain kinase I positively and negatively regulates RNA polymerase II carboxyl-terminal domain phosphorylation

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Structural remodeling of an A + U-rich RNA element by cation or AUF1 binding

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M200029-MCP200

21 January 2018

Identifiers

10.1074/MCP.M200029-MCP200

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