In vitro evidence for a long range pseudoknot in the 5'-untranslated and matrix coding regions of HIV-1 genomic RNA (Q28211352)

1

0 references

Eugene Skripkin

2

0 references

Bernard Ehresmann

3

0 references

Chantal Ehresmann

4

0 references

Roland Marquet

Journal of Biological Chemistry

5

0 references

language of work or name

English

0 references

publication date

22 February 2002

0 references

published in

0 references

volume

277

0 references

issue

8

0 references

page(s)

5995-6004

0 references

cites work

Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Two alternating structures of the HIV-1 leader RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Sequences in the 5' and 3' R elements of human immunodeficiency virus type 1 critical for efficient reverse transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

A conserved hairpin structure predicted for the poly(A) signal of human and simian immunodeficiency viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Restoration of both structure and function to a defective poly(A) site by in vitro selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Inhibition of polyadenylation by stable RNA secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

The ability of the HIV-1 AAUAAA signal to bind polyadenylation factors is controlled by local RNA structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Structural basis for the specificity of the initiation of HIV-1 reverse transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Structural and functional evidence that initiation and elongation of HIV-1 reverse transcription are distinct processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

A 19-nucleotide sequence upstream of the 5' major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Three-dimensional folding of an RNA hairpin required for packaging HIV-1

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

The major HIV-1 packaging signal is an extended bulged stem loop whose structure is altered on interaction with the Gag polyprotein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

The leader of the HIV-1 RNA genome forms a compactly folded tertiary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Dimerization of human immunodeficiency virus (type 1) RNA: stimulation by cations and possible mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Dimerization of HIV-1 genomic RNA of subtypes A and B: RNA loop structure and magnesium binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Dimerization of human immunodeficiency virus type 1 RNA involves sequences located upstream of the splice donor site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

HIV-1 genome dimerization: kissing-loop hairpin dictates whether nucleotides downstream of the 5' splice junction contribute to loose and tight dimerization of human immunodeficiency virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

HIV-1 gag proteins: diverse functions in the virus life cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Dimerization of retroviral genomic RNAs: structural and functional implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Role of distal zinc finger of nucleocapsid protein in genomic RNA dimerization of human immunodeficiency virus type 1; no role for the palindrome crowning the R-U5 hairpin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

The HIV-1 5' LTR poly(A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Translation is not required To generate virion precursor RNA in human immunodeficiency virus type 1-infected T cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Comparison of viral genomic RNA sorting mechanisms in human immunodeficiency virus type 1 (HIV-1), HIV-2, and Moloney murine leukemia virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Subgenomic mRNA regulation by a distal RNA element in a (+)-strand RNA virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Long-range RNA interaction of two sequence elements required for endonucleolytic cleavage of human insulin-like growth factor II mRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Initiation of reverse transcription of HIV-1: secondary structure of the HIV-1 RNA/tRNA(3Lys) (template/primer)

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Dimerization of HIV-1Lai RNA at low ionic strength. An autocomplementary sequence in the 5' leader region is evidenced by an antisense oligonucleotide

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

Occlusion of the HIV poly(A) site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M108972200

21 January 2018

Identifiers

DOI

10.1074/JBC.M108972200

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/62owvwiukvfe5jijgh4elysmle

mapped directly with Wikidata item

30 July 2022

based on heuristic

Fatcat ID

release_62owvwiukvfe5jijgh4elysmle

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/62owvwiukvfe5jijgh4elysmle

mapped directly with Wikidata item

30 July 2022

based on heuristic

OpenCitations bibliographic resource ID

3045290

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

https://api.fatcat.wiki/v0/release/62owvwiukvfe5jijgh4elysmle