The ATP-grasp enzymes (Q28248129)

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Language	Label	Description	Also known as
English	The ATP-grasp enzymes	scientific article

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scholarly article

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Europe PubMed Central

The ATP-grasp enzymes (English)

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organic chemistry

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author name string

Maria V Fawaz

1

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Melissa E Topper

2

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Steven M Firestine

3

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language of work or name

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publication date

December 2011

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Bioorganic Chemistry

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39

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5-6

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185-91

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Crystal structure of the α6β6 holoenzyme of propionyl-coenzyme A carboxylase

1 reference

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Structural studies of tri-functional human GART

1 reference

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Discovery of antibacterial biotin carboxylase inhibitors by virtual screening and fragment-based approaches

1 reference

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20 March 2017

Crystal structure of biotin carboxylase in complex with substrates and implications for its catalytic mechanism

1 reference

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A class of selective antibacterials derived from a protein kinase inhibitor pharmacophore

1 reference

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Structural Analysis of the Active Site Geometry of N 5 -Carboxyaminoimidazole Ribonucleotide Synthetase from Escherichia coli † , ‡

1 reference

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Structure, mechanism and regulation of pyruvate carboxylase

1 reference

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20 March 2017

Crystal Structure and Function of 5-Formaminoimidazole-4-carboxamide Ribonucleotide Synthetase from Methanocaldococcus jannaschii † , ‡

1 reference

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20 March 2017

Enzymatic characterization of a prokaryotic urea carboxylase

1 reference

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20 March 2017

Crystal structure of a lysine biosynthesis enzyme, LysX, from Thermus thermophilus HB8

1 reference

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Glutathione synthetase homologs encode alpha-L-glutamate ligases for methanogenic coenzyme F420 and tetrahydrosarcinapterin biosyntheses

1 reference

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20 March 2017

Investigation of the catalytic site within the ATP-grasp domain of Clostridium symbiosum pyruvate phosphate dikinase

1 reference

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20 March 2017

Molecular structure of Escherichia coli PurT-encoded glycinamide ribonucleotide transformylase

1 reference

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Movement of the biotin carboxylase B-domain as a result of ATP binding

1 reference

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20 March 2017

Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily

1 reference

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20 March 2017

Molecular basis of glutathione synthetase deficiency and a rare gene permutation event

1 reference

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20 March 2017

X-ray crystal structure of glycinamide ribonucleotide synthetase from Escherichia coli

1 reference

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20 March 2017

Synapsin I is structurally similar to ATP-utilizing enzymes

1 reference

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20 March 2017

A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity

1 reference

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20 March 2017

Formyl phosphate: a proposed intermediate in the reaction catalyzed by Escherichia coli PurT GAR transformylase

1 reference

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The crystal structure of succinyl-CoA synthetase from Escherichia coli at 2.5-A resolution

1 reference

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20 March 2017

Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 A resolution

1 reference

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Three-dimensional structure of the biotin carboxylase subunit of acetyl-CoA carboxylase

1 reference

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(3-Amino-2-oxoalkyl)phosphonic acids and their analogues as novel inhibitors of D-alanine:D-alanine ligase

1 reference

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20 March 2017

Molecular identification of N-acetylaspartylglutamate synthase and beta-citrylglutamate synthase

1 reference

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20 March 2017

Molecular determinants of synapsin targeting to presynaptic terminals

1 reference

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20 March 2017

Neural tube defects in mice with reduced levels of inositol 1,3,4-trisphosphate 5/6-kinase

1 reference

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20 March 2017

A vital role of tubulin-tyrosine-ligase for neuronal organization

1 reference

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20 March 2017

Inhibitors of Pyruvate Carboxylase

1 reference

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29 September 2017

N-acetylaspartylglutamate is an agonist at mGluR₃ in vivo and in vitro

1 reference

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29 September 2017

Molecular evolution of urea amidolyase and urea carboxylase in fungi

1 reference

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29 September 2017

ATP-binding site of bacterial enzymes as a target for antibacterial drug design

1 reference

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29 September 2017

Cryo-EM analysis reveals new insights into the mechanism of action of pyruvate carboxylase.

1 reference

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1 reference

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29 September 2017

Structural and functional modularity of proteins in the de novo purine biosynthetic pathway.

1 reference

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29 September 2017

Structural biology of the purine biosynthetic pathway

1 reference

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29 September 2017

Screening marine fungi for inhibitors of the C4 plant enzyme pyruvate phosphate dikinase: unguinol as a potential novel herbicide candidate

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Enzyme inhibitors as chemical tools to study enzyme catalysis: rational design, synthesis, and applications

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29 September 2017

Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase

1 reference

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29 September 2017

A mechanism for the potent inhibition of eukaryotic acetyl-coenzyme A carboxylase by soraphen A, a macrocyclic polyketide natural product.

1 reference

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29 September 2017

The biotin enzyme family: conserved structural motifs and domain rearrangements

1 reference

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Chemical and catalytic mechanisms of carboxyl transfer reactions in biotin-dependent enzymes

1 reference

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29 September 2017

Structural classification of proteins: new superfamilies

1 reference

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29 September 2017

N5-carboxyaminoimidazole ribonucleotide: evidence for a new intermediate and two new enzymatic activities in the de novo purine biosynthetic pathway of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

29 September 2017

A common fold for peptide synthetases cleaving ATP to ADP: glutathione synthetase and D-alanine:d-alanine ligase of Escherichia coli

1 reference

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29 September 2017

The structure and the mechanism of action of pyruvate carboxylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

29 September 2017

Purification and characterization of the purE, purK, and purC gene products: identification of a previously unrecognized energy requirement in the purine biosynthetic pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

29 September 2017

Evidence that carboxyphosphate is a kinetically competent intermediate in the carbamyl phosphate synthetase reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

29 September 2017

Identification of enzyme-bound activated CO2 as carbonic-phosphoric anhydride: isolation of the corresponding trimethyl derivative from the active site of glutamine-dependent carbamyl phosphate synthetase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

29 September 2017

Identification of inhibitors of N5-carboxyaminoimidazole ribonucleotide synthetase by high-throughput screening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

D-Ala-D-X ligases: evaluation of D-alanyl phosphate intermediate by MIX, PIX and rapid quench studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

Structure of the multifunctional loops in the nonclassical ATP-binding fold of glutathione synthetase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

Urea amidolyase. The involvement of biotin in urea cleavage.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

ATP-dependent inactivation and slow binding inhibition of Salmonella typhimurium D-alanine:D-alanine ligase (ADP) by (aminoalkyl)phosphinate and aminophosphonate analogues of D-alanine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

On the intermediacy of carboxyphosphate in biotin-dependent carboxylations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

Investigations of the partial reactions catalyzed by pyruvate phosphate dikinase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

Rotational resonance determination of the structure of an enzyme-inhibitor complex: phosphorylation of an (aminoalkyl)phosphinate inhibitor of D-alanyl-D-alanine ligase by ATP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

Kinetic evidence for the formation of D-alanyl phosphate in the mechanism of D-alanyl-D-alanine ligase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

Alterations in the energetics of the carbamoyl phosphate synthetase reaction by site-directed modification of the essential sulfhydryl group

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

2 June 2018

ATPase activity of biotin carboxylase provides evidence for initial activation of HCO3- by ATP in the carboxylation of biotin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

20 June 2018

Characterization of the gene rimK responsible for the addition of glutamic acid residues to the C-terminus of ribosomal protein S6 in Escherichia coli K12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

20 June 2018

ATP competitive inhibitors of D-alanine-D-alanine ligase based on protein kinase inhibitor scaffolds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Examination of the structure, stability, and catalytic potential in the engineered phosphoryl carrier domain of pyruvate phosphate dikinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Characterization of four variant forms of human propionyl-CoA carboxylase expressed in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Mutational analysis of ATP-grasp residues in the two ATP sites of Saccharomyces cerevisiae carbamoyl phosphate synthetase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Site-directed mutagenesis of ATP binding residues of biotin carboxylase. Insight into the mechanism of catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

A prokaryotic gene cluster involved in synthesis of lysine through the amino adipate pathway: a key to the evolution of amino acid biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Molecular cloning and sequence analysis of the lysR gene from the extremely thermophilic eubacterium, Thermus thermophilus HB27.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Synthesis and evaluation of inhibitors of bacterial D-alanine:D-alanine ligases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243065

27 November 2018

Substrate binding domains in pyruvate phosphate dikinase

1 reference

https://pubmed.ncbi.nlm.nih.gov/21920581

12 December 2020

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10.1016/J.BIOORG.2011.08.004

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Consolidated OpenCitations Corpus – April 2017

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Consolidated OpenCitations Corpus – April 2017

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Consolidated OpenCitations Corpus – April 2017

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Consolidated OpenCitations Corpus – April 2017

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