Group II intron retroelements: function and diversity (Q28266660)

Cytogenetics and Genome Research

Europe PubMed Central

title

Group II intron retroelements: function and diversity (English)

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author name string

A R Robart

series ordinal

1

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S Zimmerly

series ordinal

2

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language of work or name

English

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publication date

2005

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published in

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volume

110

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issue

1-4

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page(s)

589-97

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cites work

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A three-dimensional perspective on exon binding by a group II self-splicing intron

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Compilation and analysis of group II intron insertions in bacterial genomes: evidence for retroelement behavior

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ORF-less and reverse-transcriptase-encoding group II introns in archaebacteria, with a pattern of homing into related group II intron ORFs

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Database for mobile group II introns

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Retrotransposition of a yeast group II intron occurs by reverse splicing directly into ectopic DNA sites

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A maturase-encoding group III twintron is conserved in deeply rooted euglenoid species: are group III introns the chicken or the egg?

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Multiple homing pathways used by yeast mitochondrial group II introns

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Group II self-splicing introns in bacteria.

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A group II intron has invaded the genus Azotobacter and is inserted within the termination codon of the essential groEL gene.

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Genetic manipulation of Lactococcus lactis by using targeted group II introns: generation of stable insertions without selection

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A small chloroplast RNA may be required for trans-splicing in chlamydomonas reinhardtii

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Mitochondrial Mg(2+) homeostasis is critical for group II intron splicing in vivo

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Group II intron endonucleases use both RNA and protein subunits for recognition of specific sequences in double-stranded DNA.

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Group II introns designed to insert into therapeutically relevant DNA target sites in human cells

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Retrotransposition of the Ll.LtrB group II intron proceeds predominantly via reverse splicing into DNA targets.

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Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts

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Group II introns as controllable gene targeting vectors for genetic manipulation of bacteria

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Four inteins and three group II introns encoded in a bacterial ribonucleotide reductase gene.

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Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

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Trans-splicing group II introns in plant mitochondria: the complete set of cis-arranged homologs in ferns, fern allies, and a hornwort

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The age and evolution of non-LTR retrotransposable elements

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RecA-independent ectopic transposition in vivo of a bacterial group II intron

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Mechanism of maturase-promoted group II intron splicing

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Structure and activities of group II introns

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Comparative and functional anatomy of group II catalytic introns--a review

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Putative proteins related to group II intron reverse transcriptase/maturases are encoded by nuclear genes in higher plants

21 January 2018

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Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements

21 January 2018

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Effects of Maturase Binding and Mg2+ Concentration on Group II Intron RNA Folding Investigated by UV Cross-Linking

21 January 2018

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Group II intron splicing factors derived by diversification of an ancient RNA-binding domain

21 January 2018

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A trans-splicing model for the expression of the tripartite nad5 gene in wheat and maize mitochondria

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Retroids in archaea: phylogeny and lateral origins

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Characterization of the C-terminal DNA-binding/DNA endonuclease region of a group II intron-encoded protein

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Transposition of a group II intron.

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Mitochondrial splicing requires a protein from a novel helicase family

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A catalytically active group II intron domain 5 can function in the U12-dependent spliceosome

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Interaction of a group II intron ribonucleoprotein endonuclease with its DNA target site investigated by DNA footprinting and modification interference

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CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin.

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Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases

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Bacteria and Archaea Group II introns: additional mobile genetic elements in the environment

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Identification and characterization of bacterial class E group II introns.

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Excised group II introns in yeast mitochondria are lariats and can be formed by self-splicing in vitro

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Spliceosomal snRNAs: Mg(2+)-dependent chemistry at the catalytic core?

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A reverse transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA.

21 January 2018

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Trans splicing in Oenothera mitochondria: nad1 mRNAs are edited in exon and trans-splicing group II intron sequences

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Group II intron mobility in yeast mitochondria: target DNA-primed reverse transcription activity of aI1 and reverse splicing into DNA transposition sites in vitro.

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Group II intron mobility using nascent strands at DNA replication forks to prime reverse transcription

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Targeted and random bacterial gene disruption using a group II intron (targetron) vector containing a retrotransposition-activated selectable marker

21 January 2018

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A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility

21 January 2018

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Phylogenetic relationships among group II intron ORFs

21 January 2018

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Multiple exon-binding sites in class II self-splicing introns

21 January 2018

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Erratum: Retrotransposition of a bacterial group II intron

21 January 2018

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Transposition of group II intron al1 in yeast and invasion of mitochondrial genes at new locations

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