Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB (Q28297760)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

title

Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

oxidative RNA demethylation

16 January 2020

main subject

crystal structure

0 references

1 reference

oxidative RNA demethylase activity

Gene Ontology ID

GO:0035513

1 reference

oxidative DNA demethylase activity

Gene Ontology ID

GO:0035515

1 reference

oxidative DNA demethylation

Gene Ontology ID

GO:0035516

1 reference

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

author name string

Bomina Yu

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

William C Edstrom

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

Jordi Benach

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

Yoshitomo Hamuro

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

Patricia C Weber

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

John F Hunt

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

language of work or name

English

0 references

publication date

1 February 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

volume

439

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

issue

7078

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

page(s)

879-884

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage

16 January 2020

cites work

1 reference

Mutagenesis, genotoxicity, and repair of 1-methyladenine, 3-alkylcytosines, 1-methylguanine, and 3-methylthymine in alkB Escherichia coli

21 April 2017

1 reference

Crystal structure of a clavaminate synthase-Fe(II)-2-oxoglutarate-substrate-NO complex: evidence for metal centered rearrangements

21 April 2017

1 reference

Structure and mechanism of anthocyanidin synthase from Arabidopsis thaliana

21 April 2017

1 reference

AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli

21 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Human and bacterial oxidative demethylases repair alkylation damage in both RNA and DNA

21 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Alkylation damage in DNA and RNA--repair mechanisms and medical significance

21 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Repairing DNA-methylation damage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

AlkB restores the biological function of mRNA and tRNA inactivated by chemical methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Substrate specificities of bacterial and human AlkB proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

The Escherichia coli AlkB protein protects human cells against alkylation-induced toxicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Demethylation of 3-methylthymine in DNA by bacterial and human DNA dioxygenases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Repair of 3-methylthymine and 1-methylguanine lesions by bacterial and human AlkB proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Reversal of DNA alkylation damage by two human dioxygenases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Minimal methylated substrate and extended substrate range of Escherichia coli AlkB protein, a 1-methyladenine-DNA dioxygenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

AlkB reverses etheno DNA lesions caused by lipid oxidation in vitro and in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Crystal structure of the alkylsulfatase AtsK: insights into the catalytic mechanism of the Fe(II) alpha-ketoglutarate-dependent dioxygenase superfamily

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Probing the structure and function of the Escherichia coli DNA alkylation repair AlkB protein through chemical cross-linking.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Rapid freeze-quench 57Fe Mössbauer spectroscopy: monitoring changes of an iron-containing active site during a biochemical reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Structural and mechanistic studies on 2-oxoglutarate-dependent oxygenases and related enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Crystallographic and Spectroscopic Characterization of a Nonheme Fe(IV)&cjs0811;O Complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Kinetic dissection of the catalytic mechanism of taurine:alpha-ketoglutarate dioxygenase (TauD) from Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

The structural basis of cephalosporin formation in a mononuclear ferrous enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

X-ray crystal structure of Escherichia coli taurine/alpha-ketoglutarate dioxygenase complexed to ferrous iron and substrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

Herbicide-Degrading α-Keto Acid-Dependent Enzyme TfdA: Metal Coordination Environment and Mechanistic Insights†

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

A new gene (alkB) of Escherichia coli that controls sensitivity to methyl methane sulfonate

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

inferred from DOI database lookup

7 January 2021

based on heuristic

The oxo/peroxo debate: a nonheme iron perspective

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04561

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NATURE04561

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16482161%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

16 January 2020

0 references

1 reference