SON connects the splicing-regulatory network with pluripotency in human embryonic stem cells (Q28298055)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

title

SON connects the splicing-regulatory network with pluripotency in human embryonic stem cells (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

0 references

1 reference

human embryonic stem cell

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Jonathan Göke

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Bo Feng

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Huck Hui Ng

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

author name string

Friedrich Sachs

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Pierre-Étienne Jacques

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Hongqing Liang

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Paula A Bubulya

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Guillaume Bourque

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

language of work or name

English

0 references

publication date

8 September 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

page(s)

1141-1152

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

20 February 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4097007/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

A user's guide to the encyclopedia of DNA elements (ENCODE)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

SON controls cell-cycle progression by coordinated regulation of RNA splicing

20 March 2017

1 reference

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Differential expression analysis for sequence count data

20 March 2017

1 reference

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Mediator and cohesin connect gene expression and chromatin architecture

20 March 2017

1 reference

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

TopHat: discovering splice junctions with RNA-Seq

20 March 2017

1 reference

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An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

20 March 2017

1 reference

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The nonsense-mediated decay RNA surveillance pathway

20 March 2017

2 references

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20 March 2017

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Core transcriptional regulatory circuitry in human embryonic stem cells

6 April 2017

1 reference

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A GFP-based reporter system to monitor nonsense-mediated mRNA decay

20 March 2017

1 reference

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Proteomic analysis of interchromatin granule clusters

20 March 2017

1 reference

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Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Transcription repression of human hepatitis B virus genes by negative regulatory element-binding protein/SON

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Organization and conservation of the GART/SON/DONSON locus in mouse and human genomes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Initiation of DNA fragmentation during apoptosis induces phosphorylation of H2AX histone at serine 139

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Embryonic stem cell lines derived from human blastocysts

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

The SON gene encodes a conserved DNA binding protein mapping to human chromosome 21

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

20 March 2017

Cyclin A is required at two points in the human cell cycle

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Genome-wide identification of polycomb-associated RNAs by RIP-seq

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

The E4F protein is required for mitotic progression during embryonic cell cycles

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Control of the embryonic stem cell state

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

A ROCK inhibitor permits survival of dissociated human embryonic stem cells

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Pre-mRNA splicing and human disease

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Embryonic stem cell lines from human blastocysts: somatic differentiation in vitro

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

MBNL proteins repress ES-cell-specific alternative splicing and reprogramming.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Combinatorial binding in human and mouse embryonic stem cells identifies conserved enhancers active in early embryonic development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Son maintains accurate splicing for a subset of human pre-mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

An alternative splicing switch regulates embryonic stem cell pluripotency and reprogramming

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Genomic approaches to deconstruct pluripotency

29 September 2017

1 reference

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Chromatin connections to pluripotency and cellular reprogramming

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Potential clinical applications for human pluripotent stem cell-derived blood components

29 September 2017

1 reference

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A high proliferation rate is required for cell reprogramming and maintenance of human embryonic stem cell identity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

SON is a spliceosome-associated factor required for mitotic progression.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Son is essential for nuclear speckle organization and cell cycle progression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Alternative splicing in the differentiation of human embryonic stem cells into cardiac precursors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Systems biology of stem cell fate and cellular reprogramming

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Alternative splicing events identified in human embryonic stem cells and neural progenitors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Embryonic stem cells: prospects for developmental biology and cell therapy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Oct-4 knockdown induces similar patterns of endoderm and trophoblast differentiation markers in human and mouse embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Feeder-free growth of undifferentiated human embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Coupling cell division and cell death to microtubule dynamics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097007

Genome-wide kinase-chromatin interactions reveal the regulatory network of ERK signaling in human embryonic stem cells

2 June 2018

1 reference

A core Klf circuitry regulates self-renewal of embryonic stem cells.

21 January 2018

1 reference

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

21 January 2018

1 reference

Differential GC Content between Exons and Introns Establishes Distinct Strategies of Splice-Site Recognition

21 January 2018

1 reference

A PRC2-dependent repressive role of PRDM14 in human embryonic stem cells and induced pluripotent stem cell reprogramming.

21 January 2018

1 reference

hUPF2 silencing identifies physiologic substrates of mammalian nonsense-mediated mRNA decay

21 January 2018

1 reference

Knockdown of T-cell intracellular antigens triggers cell proliferation, invasion and tumour growth

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24013217

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Alternative splicing minireview series: combinatorial control facilitates splicing regulation of gene expression and enhances genome diversity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24013217

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCB2839

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

20 February 2020

1044815502

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24013217%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

PubMed publication ID

24013217

2 references