Identification of a signature motif in target mRNAs of RNA-binding protein AUF1 (Q28301813)

1

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Yuki Kuwano

2

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Ming Zhan

3

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Elizabeth J White

4

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Jennifer L Martindale

5

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Ashish Lal

Conserved GU-rich elements mediate mRNA decay by binding to CUG-binding protein 1

6

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language of work or name

English

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publication date

January 2009

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published in

Nucleic Acids Research

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volume

37

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issue

1

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page(s)

204-14

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cites work

1 reference

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The ELAV RNA-stability factor HuR binds the 5'-untranslated region of the human IGF-IR transcript and differentially represses cap-dependent and IRES-mediated translation

20 March 2017

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Functional cloning of BRF1, a regulator of ARE-dependent mRNA turnover

20 March 2017

1 reference

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AUF1 Is a bcl-2 A + U-rich element-binding protein involved in bcl-2 mRNA destabilization during apoptosis

20 March 2017

1 reference

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AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

20 March 2017

1 reference

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Control of mRNA decay by heat shock-ubiquitin-proteasome pathway

20 March 2017

1 reference

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Feedback inhibition of macrophage tumor necrosis factor-alpha production by tristetraprolin

20 March 2017

1 reference

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A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer

20 March 2017

1 reference

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Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities

20 March 2017

1 reference

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Purification, characterization, and cDNA cloning of an AU-rich element RNA-binding protein, AUF1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

RNA sequence analysis using covariance models

20 March 2017

1 reference

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Roles of AUF1 isoforms, HuR and BRF1 in ARE-dependent mRNA turnover studied by RNA interference

20 March 2017

1 reference

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From birth to death: the complex lives of eukaryotic mRNAs

20 March 2017

1 reference

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7 April 2017

HuR and mRNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

RNA regulons: coordination of post-transcriptional events

7 April 2017

1 reference

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Elucidation of a C-rich signature motif in target mRNAs of RNA-binding protein TIAR.

7 April 2017

1 reference

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Analysis of turnover and translation regulatory RNA-binding protein expression through binding to cognate mRNAs

29 September 2017

1 reference

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Competitive binding of AUF1 and TIAR to MYC mRNA controls its translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Endotoxic shock in AUF1 knockout mice mediated by failure to degrade proinflammatory cytokine mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Differential stability of thymidylate synthase 3'-untranslated region polymorphic variants regulated by AUF1.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Identification and functional outcome of mRNAs associated with RNA-binding protein TIA-1.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

The Xenopus ELAV protein ElrB represses Vg1 mRNA translation during oogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Antiapoptotic function of RNA-binding protein HuR effected through prothymosin alpha

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

A hairpin-like structure within an AU-rich mRNA-destabilizing element regulates trans-factor binding selectivity and mRNA decay kinetics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Increased stability of the p16 mRNA with replicative senescence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Concurrent versus individual binding of HuR and AUF1 to common labile target mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Functional dissection of hnRNP D suggests that nuclear import is required before hnRNP D can modulate mRNA turnover in the cytoplasm

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Identification of a target RNA motif for RNA-binding protein HuR.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Identification of RNA-binding proteins in RAW 264.7 cells that recognize a lipopolysaccharide-responsive element in the 3-untranslated region of the murine cyclooxygenase-2 mRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

RNA-binding protein HuR enhances p53 translation in response to ultraviolet light irradiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Regulation of mRNA translation by 5'- and 3'-UTR-binding factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

ELAV/Hu proteins inhibit p27 translation via an IRES element in the p27 5'UTR.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Visibly stressed: the role of eIF2, TIA-1, and stress granules in protein translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

29 September 2017

Stressful initiations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Ribonomics: identifying mRNA subsets in mRNP complexes using antibodies to RNA-binding proteins and genomic arrays

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Versatile role for hnRNP D isoforms in the differential regulation of cytoplasmic mRNA turnover

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Folding of A+U-rich RNA elements modulates AUF1 binding. Potential roles in regulation of mRNA turnover

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Down-regulation of cyclin D1 expression by prostaglandin A(2) is mediated by enhanced cyclin D1 mRNA turnover

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

The double lives of shuttling mRNA binding proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

ELAV tumor antigen, Hel-N1, increases translation of neurofilament M mRNA and induces formation of neurites in human teratocarcinoma cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Identification of TIAR as a protein binding to the translational regulatory AU-rich element of tumor necrosis factor alpha mRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Finding the most significant common sequence and structure motifs in a set of RNA sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

An A + U-rich element RNA-binding factor regulates c-myc mRNA stability in vitro

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

AUF1 and HuR proteins stabilize interleukin-8 mRNA in human saliva.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

A "liaison dangereuse" between AUF1/hnRNPD and the oncogenic tyrosine kinase NPM-ALK.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Nuclear import and export functions in the different isoforms of the AUF1/heterogeneous nuclear ribonucleoprotein protein family

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

Embryonic lethal abnormal visual RNA-binding proteins involved in growth, differentiation, and posttranscriptional gene expression

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

T-cell Intracellular Antigen-1 (TIA-1)-induced Translational Silencing Promotes the Decay of Selected mRNAs

2 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN929

Posttranscriptional derepression of GADD45alpha by genotoxic stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN929

The peptidyl-prolyl isomerase Pin1 regulates the stability of granulocyte-macrophage colony-stimulating factor mRNA in activated eosinophils.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN929

AUF1 is expressed in the developing brain, binds to AT-rich double-stranded DNA, and regulates enkephalin gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN929

Tissue distribution of AU-rich mRNA-binding proteins involved in regulation of mRNA decay.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN929

Estradiol up-regulates AUF1p45 binding to stabilizing regions within the 3'-untranslated region of estrogen receptor alpha mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN929

A new player in oncogenesis: AUF1/hnRNPD overexpression leads to tumorigenesis in transgenic mice

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2615618

AUF1 binding affinity to A+U-rich elements correlates with rapid mRNA degradation

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19033365

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Involvement of RNA binding proteins AUF1 in mammary gland differentiation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19033365

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification of AUF1 as a parathyroid hormone mRNA 3'-untranslated region-binding protein that determines parathyroid hormone mRNA stability

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19033365