Low-complexity regions in Plasmodium falciparum proteins (Q28346049)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11157785%20AND%20SRC:MED&resulttype=core&format=json

3 November 2019

title

Low-complexity regions in Plasmodium falciparum proteins (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11157785%20AND%20SRC:MED&resulttype=core&format=json

3 November 2019

main subject

Plasmodium falciparum

0 references

author

Elisabetta Pizzi

series ordinal

1

1 reference

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3 November 2019

author name string

C Frontali

series ordinal

2

1 reference

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3 November 2019

language of work or name

English

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publication date

1 February 2001

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3 November 2019

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3 November 2019

volume

11

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3 November 2019

page(s)

218-229

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3 November 2019

issue

2

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

3 November 2019

cites work

1 reference

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Complete DNA sequence of yeast chromosome II

20 March 2017

1 reference

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A simple method for displaying the hydropathic character of a protein

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

A comprehensive set of sequence analysis programs for the VAX

20 March 2017

1 reference

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Methods and algorithms for statistical analysis of protein sequences

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Sequence complexity of disordered protein

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

7 April 2017

1 reference

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Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

A global compositional complexity measure for biological sequences: AT-rich and GC-rich genomes encode less complex proteins

24 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Deviations from Chargaff's second parity rule correlate with direction of transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

The putative gamma-glutamylcysteine synthetase from Plasmodium falciparum contains large insertions and a variable tandem repeat

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Compositional constraints in the extremely GC-poor genome of Plasmodium falciparum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Antigenic variation and immune evasion in Plasmodium falciparum malaria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Trinucleotide repeats and long homopeptides in genes and proteins associated with nervous system disease and development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Codon reiteration and the evolution of proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Dynamical assessment of physiological systems and states using recurrence plot strategies

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Non-globular domains in protein sequences: automated segmentation using complexity measures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Genome plasticity in Plasmodium

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Molecular drive: a cohesive mode of species evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Repetitive proteins and genes of malaria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Does biased gene conversion influence polymorphism in the circumsporozoite protein-encoding gene of Plasmodium vivax?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Detection of latent sequence periodicities.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Simple sequence is abundant in eukaryotic proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Biased amino acid composition in repeat regions of Plasmodium antigens.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

The putative gene for the first enzyme of glutathione biosynthesis in Plasmodium berghei and Plasmodium falciparum.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

2 June 2018

Hydrophobicity regained.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Cryptic simplicity in DNA is a major source of genetic variation.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Analysis of sequences from the extremely A + T-rich genome of Plasmodium falciparum.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Divergence of noncoding sequences and of insertions encoding nonglobular domains at a genomic region well conserved in plasmodia.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

SEGMENT: identifying compositional domains in DNA sequences.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Amino acid reiterations in yeast are overrepresented in particular classes of proteins and show evidence of a slippage-like mutational process.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Local-scale repetitiveness in amino acid use in eukaryote protein sequences: a genomic factor in protein evolution.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

Thousands of proteins likely to have long disordered regions.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

An analysis of structural instances of low complexity sequence segments.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311019

27 November 2018

1 reference

12 December 2020

Zones of low entropy in genomic sequences

1 reference

12 December 2020

The correlation of protein hydropathy with the base composition of coding sequences

1 reference

12 December 2020

Conservation and divergence of repeated structures in Plasmodium genomes: the molecular drift

1 reference

12 December 2020

Flexibility plot of proteins

1 reference

12 December 2020

Evolutionary profile of the circumsporozoite gene of the Plasmodium cynomolgi complex

1 reference

12 December 2020

Accuracy of protein flexibility predictions

1 reference

12 December 2020

Analysis of compositionally biased regions in sequence databases

1 reference

12 December 2020

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11157785%20AND%20SRC:MED&resulttype=core&format=json

3 November 2019

1 reference