Reconstruction and validation of RefRec: a global model for the yeast molecular interaction network (Q28473936)

22 June 2017

Reconstruction and validation of RefRec: a global model for the yeast molecular interaction network (English)

1 reference

22 June 2017

molecular interaction

1 reference

8

Harri Lähdesmäki

Harri

Lähdesmäki

1 reference

20 October 2023

14

Olli Yli-Harja

Olli

Yli-Harja

1 reference

20 October 2023

Andreas Beyer

9

Andreas

Beyer

1 reference

20 October 2023

Tommi Aho

1

Tommi

Aho

1 reference

22 June 2017

Henrikki Almusa

2

Henrikki

Almusa

1 reference

22 June 2017

Jukka Matilainen

3

Jukka

Matilainen

1 reference

22 June 2017

Antti Larjo

4

Antti

Larjo

1 reference

22 June 2017

Pekka Ruusuvuori

5

Pekka

Ruusuvuori

1 reference

22 June 2017

Kaisa-Leena Aho

6

Kaisa-Leena

Aho

1 reference

22 June 2017

Thomas Wilhelm

7

Thomas

Wilhelm

1 reference

22 June 2017

Manu Harju

10

Manu

Harju

1 reference

22 June 2017

Sharif Chowdhury

11

Sharif

Chowdhury

1 reference

22 June 2017

Kalle Leinonen

12

Kalle

Leinonen

1 reference

22 June 2017

Christophe Roos

13

Christophe

Roos

1 reference

22 June 2017

language of work or name

English

0 references

publication date

14 May 2010

1 reference

22 June 2017

1 reference

22 June 2017

5

1 reference

22 June 2017

5

1 reference

22 June 2017

e10662

1 reference

Creative Commons Attribution 4.0 International

22 June 2017

start time

14 May 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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ChEBI: a database and ontology for chemical entities of biological interest

19 March 2017

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19 March 2017

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NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

19 March 2017

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BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

19 March 2017

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PUMA2--grid-based high-throughput analysis of genomes and metabolic pathways

19 March 2017

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From genomics to chemical genomics: new developments in KEGG

19 March 2017

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Minimum information requested in the annotation of biochemical models (MIRIAM)

19 March 2017

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KEGG as a glycome informatics resource

19 March 2017

1 reference

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Enhancement of the chemical semantic web through the use of InChI identifiers

19 March 2017

1 reference

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Global mapping of the yeast genetic interaction network

19 March 2017

1 reference

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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

19 March 2017

1 reference

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Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

19 March 2017

1 reference

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The Pathway Tools software

19 March 2017

1 reference

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Functional profiling of the Saccharomyces cerevisiae genome

19 March 2017

1 reference

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Systematic genetic analysis with ordered arrays of yeast deletion mutants

19 March 2017

1 reference

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Gene ontology: tool for the unification of biology

19 March 2017

1 reference

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The ENZYME database in 2000

19 March 2017

1 reference

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Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871048

19 March 2017

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Database resources of the National Center for Biotechnology Information

19 March 2017

1 reference

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The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

7 April 2017

1 reference

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UniRef: comprehensive and non-redundant UniProt reference clusters

7 April 2017

1 reference

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The universal protein resource (UniProt)

7 April 2017

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KAAS: an automatic genome annotation and pathway reconstruction server

7 April 2017

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IntAct--open source resource for molecular interaction data

7 April 2017

1 reference

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The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism

7 April 2017

1 reference

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New surveyor tools for charting microbial metabolic maps.

29 September 2017

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The vertebrate genome annotation (Vega) database

29 September 2017

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Toward the automated generation of genome-scale metabolic networks in the SEED.

29 September 2017

1 reference

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What is a support vector machine?

29 September 2017

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Accelerating the reconstruction of genome-scale metabolic networks

29 September 2017

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Addressing the problems with life-science databases for traditional uses and systems biology

29 September 2017

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Identifying metabolic enzymes with multiple types of association evidence

29 September 2017

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GNARE: automated system for high-throughput genome analysis with grid computational backend

29 September 2017

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Metabolic functions of duplicate genes in Saccharomyces cerevisiae

29 September 2017

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Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model

29 September 2017

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Flux coupling analysis of genome-scale metabolic network reconstructions.

29 September 2017

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Systems biology markup language: Level 2 and beyond

29 September 2017

1 reference

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Integrating biological databases

29 September 2017

1 reference

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WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871048

How complete are current yeast and human protein-interaction networks?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871048

LIGAND: chemical database for enzyme reactions.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871048

Filling gaps in a metabolic network using expression information.

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010662

Predicting genes for orphan metabolic activities using phylogenetic profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010662

SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010662

High-throughput classification of yeast mutants for functional genomics using metabolic footprinting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010662

Essentiality and damage in metabolic networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0010662

10.1371/JOURNAL.PONE.0010662

21 January 2018

Identifiers

DOI

1 reference

22 June 2017

0 references

0 references

1 reference