Microbial co-occurrence relationships in the human microbiome (Q28481283)

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8 February 2020

title

Microbial co-occurrence relationships in the human microbiome (English)

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8 February 2020

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7

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8 February 2020

Karoline Faust

1

1 reference

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8 February 2020

Fah J. Sathirapongsasuti

2

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8 February 2020

Jacques Izard

3

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8 February 2020

Nicola Segata

4

1 reference

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8 February 2020

Jeroen Raes

6

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8 February 2020

author name string

Dirk Gevers

5

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8 February 2020

language of work or name

English

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publication date

12 July 2012

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PLOS Computational Biology

8 February 2020

published in

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8 February 2020

volume

8

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8 February 2020

page(s)

e1002606

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8 February 2020

issue

7

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Creative Commons Attribution 4.0 International

8 February 2020

copyright license

start time

12 July 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Growth, structure, and classification of Selenomonas

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19 March 2017

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UCHIME improves sensitivity and speed of chimera detection

19 March 2017

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Bacterial community variation in human body habitats across space and time

7 April 2017

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

7 April 2017

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7 April 2017

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Hierarchical organization of modularity in metabolic networks

7 April 2017

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Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples

7 April 2017

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Bacterial biogeography of the human digestive tract

29 September 2017

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Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

29 September 2017

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Microbial eukaryotes in the human microbiome: ecology, evolution, and future directions

29 September 2017

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Bacterial interactions in dental biofilm

29 September 2017

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Investigating the biological and clinical significance of human dysbioses

29 September 2017

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29 September 2017

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29 September 2017

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Marine bacterial, archaeal and protistan association networks reveal ecological linkages.

29 September 2017

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Gut microbiome-host interactions in health and disease

29 September 2017

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Metagenomic analyses: past and future trends

29 September 2017

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Microbiota restoration: natural and supplemented recovery of human microbial communities

29 September 2017

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29 September 2017

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Supervised classification of microbiota mitigates mislabeling errors

29 September 2017

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Bacterial 16S sequence analysis of severe caries in young permanent teeth

29 September 2017

1 reference

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Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome

29 September 2017

1 reference

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Creating and characterizing communities of human gut microbes in gnotobiotic mice

29 September 2017

1 reference

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Oral multispecies biofilm development and the key role of cell-cell distance.

29 September 2017

1 reference

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A global network of coexisting microbes from environmental and whole-genome sequence data

29 September 2017

1 reference

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Emergence of spatial structure in cell groups and the evolution of cooperation

29 September 2017

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The large-scale organization of the bacterial network of ecological co-occurrence interactions.

29 September 2017

1 reference

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Success of self-administered home fecal transplantation for chronic Clostridium difficile infection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395616

Bacterial interactions in dental biofilm development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395616

What is microbial community ecology?

29 September 2017

1 reference

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Pyramidobacter piscolens gen. nov., sp. nov., a member of the phylum 'Synergistetes' isolated from the human oral cavity

29 September 2017

1 reference

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Multicellular behavior in bacteria: communication, cooperation, competition and cheating

29 September 2017

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Interspecies interactions within oral microbial communities

29 September 2017

1 reference

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Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

29 September 2017

1 reference

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A comparison of taxon co-occurrence patterns for macro- and microorganisms

29 September 2017

1 reference

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Emergent biogeography of microbial communities in a model ocean

29 September 2017

1 reference

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A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria

29 September 2017

1 reference

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Comparison of the localization and post-translational modification of Campylobacter coli CjaC and its homolog from Campylobacter jejuni, Cj0734c/HisJ.

29 September 2017

1 reference

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Symbiosis insights through metagenomic analysis of a microbial consortium

29 September 2017

1 reference

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Defining the normal bacterial flora of the oral cavity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395616

War and peace at mucosal surfaces

29 September 2017

1 reference

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Discovery of uncharacterized cellular systems by genome-wide analysis of functional linkages

29 September 2017

1 reference

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Role of Fusobacterium nucleatum and coaggregation in anaerobe survival in planktonic and biofilm oral microbial communities during aeration

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395616

Intergeneric coaggregation of oral Treponema spp. with Fusobacterium spp. and intrageneric coaggregation among Fusobacterium spp.

29 September 2017

1 reference

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Hydrogen peroxide excretion by oral streptococci and effect of lactoperoxidase-thiocyanate-hydrogen peroxide.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395616

Coaggregation of Fusobacterium nucleatum, Selenomonas flueggei, Selenomonas infelix, Selenomonas noxia, and Selenomonas sputigena with strains from 11 genera of oral bacteria.

29 September 2017

1 reference

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Prevotella, a new genus to include Bacteroides melaninogenicus and related species formerly classified in the genus Bacteroides

29 September 2017

1 reference

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A Clarification of Interactions in Ecological Systems

29 September 2017

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002606

Bacteroides forsythus sp. nov., a Slow-Growing, Fusiform Bacteroides sp. from the Human Oral Cavity

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002606

Periodontal therapy improves gastric Helicobacter pylori eradication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002606

Molecular eco-systems biology: towards an understanding of community function

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002606

A Closer Look at Bacteroides: Phylogenetic Relationship and Genomic Implications of a Life in the Human Gut

21 January 2018

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Microbiology. Getting in touch with your friends

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22807668

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1002606

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22807668%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/FaustSISGRH12

8 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22807668%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22807668%20AND%20SRC:MED&resulttype=core&format=json