Combined species identification, genotyping, and drug resistance detection of Mycobacterium tuberculosis cultures by MLPA on a bead-based array (Q28482405)

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English	Combined species identification, genotyping, and drug resistance detection of Mycobacterium tuberculosis cultures by MLPA on a bead-based array	scientific article

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11 February 2020

Combined species identification, genotyping, and drug resistance detection of Mycobacterium tuberculosis cultures by MLPA on a bead-based array (English)

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11 February 2020

species identification

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Mycobacterium tuberculosis

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Stefan Panaiotov

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Nadia Brankova

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Edgar Abadía

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Rina de Zwaan

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20 August 2012

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20 August 2012

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Xpert® MTB/RIF assay: development, evaluation and implementation of a new rapid molecular diagnostic for tuberculosis and rifampicin resistance

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19 March 2017

Mycobacterium africanum--review of an important cause of human tuberculosis in West Africa

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19 March 2017

The past and future of tuberculosis research

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19 March 2017

Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints

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High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography

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19 March 2017

Genotyping of Mycobacterium tuberculosis clinical isolates in two cities of Turkey: description of a new family of genotypes that is phylogeographically specific for Asia Minor

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19 March 2017

Relative quantification of 40 nucleic acid sequences by multiplex ligation-dependent probe amplification

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A new evolutionary scenario for the Mycobacterium tuberculosis complex

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19 March 2017

The molecular basis of resistance to isoniazid, rifampin, and pyrazinamide in Mycobacterium tuberculosis

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Molecular genetic basis of antimicrobial agent resistance in Mycobacterium tuberculosis: 1998 update

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A novel pathogenic taxon of the Mycobacterium tuberculosis complex, Canetti: characterization of an exceptional isolate from Africa

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Variable host-pathogen compatibility in Mycobacterium tuberculosis

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Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology

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Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology

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7 April 2017

Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination

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7 April 2017

Combination of single nucleotide polymorphism and variable-number tandem repeats for genotyping a homogenous population of Mycobacterium tuberculosis Beijing strains in China

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29 September 2017

SNP/RD typing of Mycobacterium tuberculosis Beijing strains reveals local and worldwide disseminated clonal complexes

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29 September 2017

Evaluation of two molecular assays for rapid detection of mycobacterium tuberculosis resistance to fluoroquinolones in high-tuberculosis and -multidrug-resistance Settings

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29 September 2017

The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: providing guidelines for Quality Assurance when working on membranes

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29 September 2017

Molecular detection of mutations associated with first- and second-line drug resistance compared with conventional drug susceptibility testing of Mycobacterium tuberculosis

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Evaluation of the MTBDRsl test for detection of second-line-drug resistance in Mycobacterium tuberculosis

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29 September 2017

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29 September 2017

Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies.

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29 September 2017

Rapid detection of Mycobacterium tuberculosis and rifampin resistance by use of on-demand, near-patient technology

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29 September 2017

High level of cross-resistance between kanamycin, amikacin, and capreomycin among Mycobacterium tuberculosis isolates from Georgia and a close relation with mutations in the rrs gene

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29 September 2017

Liquid culture for Mycobacterium tuberculosis: proceed, but with caution

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29 September 2017

Fluoroquinolone resistance in Mycobacterium tuberculosis and mutations in gyrA and gyrB.

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29 September 2017

Clusters of multidrug-resistant Mycobacterium tuberculosis cases, Europe

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29 September 2017

Sequence analyses of just four genes to detect extensively drug-resistant Mycobacterium tuberculosis strains in multidrug-resistant tuberculosis patients undergoing treatment.

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29 September 2017

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29 September 2017

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29 September 2017

Application of sensitive and specific molecular methods to uncover global dissemination of the major RDRio Sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family

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29 September 2017

Prevalence of and molecular basis for tuberculosis drug resistance in the Republic of Georgia: validation of a QIAplex system for detection of drug resistance-related mutations

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29 September 2017

Evaluation of the GenoType MTBDRplus assay for rifampin and isoniazid susceptibility testing of Mycobacterium tuberculosis strains and clinical specimens

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29 September 2017

Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development.

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29 September 2017

Novel genetic polymorphisms that further delineate the phylogeny of the Mycobacterium tuberculosis complex

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29 September 2017

Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP se

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Novel gyrase mutations in quinolone-resistant and -hypersusceptible clinical isolates of Mycobacterium tuberculosis: functional analysis of mutant enzymes

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29 September 2017

Use of the genotype MTBDR assay for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis complex isolates

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29 September 2017

Genomic deletions classify the Beijing/W strains as a distinct genetic lineage of Mycobacterium tuberculosis

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29 September 2017

Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

Molecular determinants of drug resistance in tuberculosis.

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29 September 2017

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29 September 2017

Antimicrobial agent resistance in mycobacteria: molecular genetic insights.

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29 September 2017

PCR assay based on DNA coding for 16S rRNA for detection and identification of mycobacteria in clinical samples

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29 September 2017

Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method

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29 September 2017

Production of single-stranded DNA templates by exonuclease digestion following the polymerase chain reaction.

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29 September 2017

Occurrence and stability of insertion sequences in Mycobacterium tuberculosis complex strains: evaluation of an insertion sequence-dependent DNA polymorphism as a tool in the epidemiology of tuberculosis

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29 September 2017

Single nucleotide polymorphisms in cell wall biosynthesis-associated genes and phylogeny of Mycobacterium tuberculosis lineages

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2 June 2018

A rapid multiplex assay for nucleic acid-based diagnostics

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2 June 2018

Genetics of drug resistance in tuberculosis

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2 June 2018

Impact of homoplasy on variable numbers of tandem repeats and spoligotypes in Mycobacterium tuberculosis.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Mutations in the regulatory network underlie the recent clonal expansion of a dominant subclone of the Mycobacterium tuberculosis Beijing genotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Resolving lineage assignation on Mycobacterium tuberculosis clinical isolates classified by spoligotyping with a new high-throughput 3R SNPs based method.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Mycobacterium tuberculosis complex CRISPR genotyping: improving efficiency, throughput and discriminative power of 'spoligotyping' with new spacers and a microbead-based hybridization assay.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

The role of molecular epidemiology in low-income, high-burden countries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

MLPA diagnostics of complex microbial communities: relative quantification of bacterial species in oral biofilms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Multidrug-resistant tuberculosis in Lisbon, Portugal: a molecular epidemiological perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

The use of macroarrays for the identification of MDR Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Molecular characterisation of streptomycin-resistant Mycobacterium tuberculosis strains isolated in Poland

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Macro-array and bioinformatic analyses reveal mycobacterial 'core' genes, variation in the ESAT-6 gene family and new phylogenetic markers for the Mycobacterium tuberculosis complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

Evaluation of a commercial line probe assay for identification of mycobacterium species from liquid and solid culture.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3423362

27 November 2018

The use of phosphorothioate primers and exonuclease hydrolysis for the preparation of single-stranded PCR products and their detection by solid-phase hybridization

1 reference

https://pubmed.ncbi.nlm.nih.gov/22916230

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single nucleotide polymorphism determination using primer extension and time-of-flight mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/22916230

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from 4 geographic sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/22916230

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Application of the Capilia TB assay for culture confirmation of Mycobacterium tuberculosis complex isolates

1 reference

https://pubmed.ncbi.nlm.nih.gov/22916230

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stepwise decrease in moxifloxacin susceptibility amongst clinical isolates of multidrug-resistant Mycobacterium tuberculosis: correlation with ofloxacin susceptibility

1 reference

https://pubmed.ncbi.nlm.nih.gov/22916230

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of mutations in streptomycin-resistant Mycobacterium tuberculosis clinical isolates in the area of Barcelona

1 reference

https://pubmed.ncbi.nlm.nih.gov/22916230

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0043240

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22916230%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

2012PLoSO...743240B

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22916230%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22916230%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

ResearchGate publication ID

0 references

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