Genomic characterization of Burkholderia pseudomallei isolates selected for medical countermeasures testing: comparative genomics associated with differential virulence (Q28544928)

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English	Genomic characterization of Burkholderia pseudomallei isolates selected for medical countermeasures testing: comparative genomics associated with differential virulence	scientific article

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scholarly article

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Genomic characterization of Burkholderia pseudomallei isolates selected for medical countermeasures testing: comparative genomics associated with differential virulence (English)

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Burkholderia pseudomallei

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comparative genomics

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based on heuristic

inferred from title

9

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Apichai Tuanyok

10

object named as

Apichai Tuanyok

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6

object named as

Bart J Currie

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1

object named as

Jason W Sahl

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Christopher J Allender

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object named as

Christopher J Allender

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Rebecca E Colman

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object named as

Rebecca E Colman

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object named as

James M Schupp

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object named as

H Carl Gelhaus

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author name string

Katy J Califf

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Kristopher E Van Zandt

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language of work or name

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publication date

2015

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10

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3

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e0121052

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copyright license

Creative Commons Attribution 4.0 International

24 March 2015

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April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

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MUMmer

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

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19 March 2017

An objective approach for Burkholderia pseudomallei strain selection as challenge material for medical countermeasures efficacy testing

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19 March 2017

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19 March 2017

Mugsy: fast multiple alignment of closely related whole genomes

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19 March 2017

Protein secretion systems in Pseudomonas aeruginosa: A wealth of pathogenic weapons

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19 March 2017

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

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19 March 2017

Molecular insights into Burkholderia pseudomallei and Burkholderia mallei pathogenesis

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19 March 2017

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6 April 2017

QIIME allows analysis of high-throughput community sequencing data

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19 March 2017

A genomic survey of positive selection in Burkholderia pseudomallei provides insights into the evolution of accidental virulence

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19 March 2017

Burkholderia thailandensis as a model system for the study of the virulence-associated type III secretion system of Burkholderia pseudomallei

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19 March 2017

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19 March 2017

Melioidosis: insights into the pathogenicity of Burkholderia pseudomallei

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19 March 2017

Bacterial genome adaptation to niches: divergence of the potential virulence genes in three Burkholderia species of different survival strategies.

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19 March 2017

Melioidosis: epidemiology, pathophysiology, and management

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4372212

19 March 2017

Visualization of comparative genomic analyses by BLAST score ratio

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19 March 2017

Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei

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19 March 2017

Multilocus Sequence Typing and Evolutionary Relationships among the Causative Agents of Melioidosis and Glanders, Burkholderia pseudomallei and Burkholderia mallei

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19 March 2017

Burkholderia pseudomallei induces cell fusion and actin-associated membrane protrusion: a possible mechanism for cell-to-cell spreading

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phangorn: phylogenetic analysis in R

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Circos: an information aesthetic for comparative genomics

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ABySS: a parallel assembler for short read sequence data

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7 April 2017

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4372212

7 April 2017

Fast algorithms for large-scale genome alignment and comparison

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7 April 2017

The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes

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29 September 2017

Variable virulence factors in Burkholderia pseudomallei (melioidosis) associated with human disease

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29 September 2017

Genome Sequence of Burkholderia pseudomallei NCTC 13392.

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29 September 2017

Mechanisms of antibiotic resistance in Burkholderia pseudomallei: implications for treatment of melioidosis

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29 September 2017

Melioidosis: a clinical overview

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29 September 2017

96-plex molecular barcoding for the Illumina Genome Analyzer

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29 September 2017

The Burkholderia pseudomallei type III secretion system and BopA are required for evasion of LC3-associated phagocytosis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4372212

29 September 2017

Identification of motifs of Burkholderia pseudomallei BimA required for intracellular motility, actin binding, and actin polymerization

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29 September 2017

Genome-wide analysis reveals loci encoding anti-macrophage factors in the human pathogen Burkholderia pseudomallei K96243

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29 September 2017

The epidemiology and clinical spectrum of melioidosis: 540 cases from the 20 year Darwin prospective study

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29 September 2017

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29 September 2017

The molecular and cellular basis of pathogenesis in melioidosis: how does Burkholderia pseudomallei cause disease?

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29 September 2017

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29 September 2017

Genomic islands from five strains of Burkholderia pseudomallei

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29 September 2017

Prevalence and sequence diversity of a factor required for actin-based motility in natural populations of Burkholderia species

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29 September 2017

Burkholderia pseudomallei genome plasticity associated with genomic island variation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4372212

29 September 2017

A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions

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29 September 2017

Characterization of the icmH and icmF genes required for Legionella pneumophila intracellular growth, genes that are present in many bacteria associated with eukaryotic cells

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29 September 2017

An Inv/Mxi-Spa-like type III protein secretion system in Burkholderia pseudomallei modulates intracellular behaviour of the pathogen

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29 September 2017

A comparative genomic analysis of diverse clonal types of enterotoxigenic Escherichia coli reveals pathovar-specific conservation

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BALB/c and C57Bl/6 mice infected with virulent Burkholderia pseudomallei provide contrasting animal models for the acute and chronic forms of human melioidosis.

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Comparative genome assembly.

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21 January 2018

Using MUMmer to identify similar regions in large sequence sets.

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THE RETENTION INDEX AND THE RESCALED CONSISTENCY INDEX

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Use of Ranks in One-Criterion Variance Analysis

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Burkholderia pseudomallei virulence: definition, stability and association with clonality.

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21 January 2018

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Inferring evolutionary trees with PAUP*.

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12 December 2020

based on heuristic

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Attenuated virulence and protective efficacy of a Burkholderia pseudomallei bsa type III secretion mutant in murine models of melioidosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/25803742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1371/JOURNAL.PONE.0121052

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2015PLoSO..1021052S

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