Comparative Transcriptome Analysis of Shoots and Roots of TNG67 and TCN1 Rice Seedlings under Cold Stress and Following Subsequent Recovery: Insights into Metabolic Pathways, Phytohormones, and Transcription Factors (Q28546123)

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English	Comparative Transcriptome Analysis of Shoots and Roots of TNG67 and TCN1 Rice Seedlings under Cold Stress and Following Subsequent Recovery: Insights into Metabolic Pathways, Phytohormones, and Transcription Factors	scientific article

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scholarly article

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Comparative Transcriptome Analysis of Shoots and Roots of TNG67 and TCN1 Rice Seedlings under Cold Stress and Following Subsequent Recovery: Insights into Metabolic Pathways, Phytohormones, and Transcription Factors (English)

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metabolic pathway

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inferred from title

4

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Li-Yu Liu

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object named as

Men-Chi Chang

5

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Yun-Wei Yang

1

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Hung-Chi Chen

2

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Wei-Fu Jen

3

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publication date

2015

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10

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7

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e0131391

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Creative Commons Attribution 4.0 International

2 July 2015

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April 2022 Public Data File from Crossref

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Cytoscape

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Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

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inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

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Development of a microarray for two rice subspecies: characterization and validation of gene expression in rice tissues

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29 September 2017

Global expression profiling of low temperature induced genes in the chilling tolerant japonica rice Jumli Marshi

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Endogenous auxin and jasmonic acid levels are differentially modulated by abiotic stresses in rice

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29 September 2017

Jasmonate regulates the inducer of cbf expression-C-repeat binding factor/DRE binding factor1 cascade and freezing tolerance in Arabidopsis

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29 September 2017

Identification of genes involved in the response of Arabidopsis to simultaneous biotic and abiotic stresses

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The phytohormone crosstalk paradigm takes center stage in understanding how plants respond to abiotic stresses.

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Identification of transcription factors potential related to brown planthopper resistance in rice via microarray expression profiling

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29 September 2017

Genome-wide gene expression profiling of introgressed indica rice alleles associated with seedling cold tolerance improvement in a japonica rice background

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29 September 2017

Comparative transcriptome profiling of chilling stress responsiveness in two contrasting rice genotypes

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29 September 2017

Auxin: a regulator of cold stress response

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29 September 2017

Seven zinc-finger transcription factors are novel regulators of the stress responsive gene OsDREB1B.

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29 September 2017

A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice

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29 September 2017

Analysis of cytokinin mutants and regulation of cytokinin metabolic genes reveals important regulatory roles of cytokinins in drought, salt and abscisic acid responses, and abscisic acid biosynthesis

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29 September 2017

ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress

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29 September 2017

CONSTANS and the evolutionary origin of photoperiodic timing of flowering.

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Common and distinct organ and stress responsive transcriptomic patterns in Oryza sativa and Arabidopsis thaliana

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29 September 2017

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29 September 2017

Genome-wide analysis of NAC transcription factor family in rice

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29 September 2017

A subset of cytokinin two-component signaling system plays a role in cold temperature stress response in Arabidopsis

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29 September 2017

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

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29 September 2017

Energy signaling in the regulation of gene expression during stress

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29 September 2017

Proteasome regulation, plant growth and stress tolerance

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29 September 2017

Ubiquitin-mediated regulation of apoptosis

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29 September 2017

A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes

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29 September 2017

Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice

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29 September 2017

Functional analysis of AHK1/ATHK1 and cytokinin receptor histidine kinases in response to abscisic acid, drought, and salt stress in Arabidopsis

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29 September 2017

Cold stress regulation of gene expression in plants.

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29 September 2017

Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice

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29 September 2017

An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling-tolerant japonica rice

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29 September 2017

Overexpression of an R1R2R3 MYB gene, OsMYB3R-2, increases tolerance to freezing, drought, and salt stress in transgenic Arabidopsis

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29 September 2017

Involvement of polyamines in plant response to abiotic stress

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29 September 2017

Integration of plant responses to environmentally activated phytohormonal signals

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29 September 2017

A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis

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29 September 2017

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29 September 2017

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21 January 2018

Annotations and functional analyses of the rice WRKY gene superfamily reveal positive and negative regulators of abscisic acid signaling in aleurone cells

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21 January 2018

Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range

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21 January 2018

CTD phosphatases in the attenuation of wound-induced transcription of jasmonic acid biosynthetic genes in Arabidopsis

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21 January 2018

Cytoplasmic alkalization precedes reactive oxygen species production during methyl jasmonate- and abscisic acid-induced stomatal closure

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21 January 2018

Mutations in the gravity persistence signal loci in Arabidopsis disrupt the perception and/or signal transduction of gravitropic stimuli

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Molecular characterization and expression profiles of MaCOL1, a CONSTANS-like gene in banana fruit

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Characterization of the response of the Arabidopsis response regulator gene family to cytokinin.

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12 December 2020

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Low temperature induction of Arabidopsis CBF1, 2, and 3 is gated by the circadian clock

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12 December 2020

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Ethylene signaling negatively regulates freezing tolerance by repressing expression of CBF and type-A ARR genes in Arabidopsis

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Cold stress-induced acclimation in rice is mediated by root-specific aquaporins

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Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants

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10.1371/JOURNAL.PONE.0131391

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Consolidated OpenCitations Corpus – April 2017

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2015PLoSO..1031391Y

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Consolidated OpenCitations Corpus – April 2017

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PMC publication ID

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Consolidated OpenCitations Corpus – April 2017

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Consolidated OpenCitations Corpus – April 2017

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